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Aliases for LOC102724708 Gene

Subcategory (RNA class) for LOC102724708 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724708 Gene

  • Uncharacterized LOC102724708 3

External Ids for LOC102724708 Gene

Previous GeneCards Identifiers for LOC102724708 Gene

  • GC08U901853

Summaries for LOC102724708 Gene

GeneCards Summary for LOC102724708 Gene

LOC102724708 (Uncharacterized LOC102724708) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC102724708 include Febrile Seizures, Familial, 11 and Epilepsy, Familial Temporal Lobe, 5.

Additional gene information for LOC102724708 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724708 Gene

Genomics for LOC102724708 Gene

GeneHancer (GH) Regulatory Elements for LOC102724708 Gene

Promoters and enhancers for LOC102724708 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J067342 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 +0.1 54 4.2 ZFX ELF3 ZNF148 NKRF POLR2A ZNF687 ZSCAN21 NCOA6 YY1 CREM ENSG00000271966 LOC102724708 ARFGEF1 GC08P067259
GH08J067339 Enhancer 0.7 ENCODE 0.7 -3.9 -3914 1.1 CTCF RAD21 REST ZNF740 POLR2A MEF2D SMC3 GATA3 ZNF335 NFIL3 COPS5 CSPP1 PPP1R42 ARFGEF1 LOC102724708 GC08M067260 GC08P067259
GH08J067316 Enhancer 0.7 Ensembl ENCODE 0.3 -26.6 -26626 1.6 USF1 FOSL1 CEBPB JUND VEZF1 HLF COPS5 CSPP1 PPP1R42 LOC102724708 ARFGEF1 GC08M067260 GC08P067259
GH08J067350 Enhancer 0.4 Ensembl 0.4 +7.8 7754 2.8 CREB1 ATF7 ATF2 VXN LOC102724708 ENSG00000271966 RPL17P31 GC08P067259
GH08J067348 Enhancer 0.4 Ensembl 0.4 +5.4 5354 1.2 ZNF316 SOX6 MAFG ENSG00000271966 LOC102724708 RPL17P31 GC08P067259
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724708 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724708 Gene

Genomic Locations for LOC102724708 Gene
chr8:67,343,647-67,375,213
(GRCh38/hg38)
Size:
31,567 bases
Orientation:
Plus strand

Genomic View for LOC102724708 Gene

Genes around LOC102724708 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724708 Gene

Proteins for LOC102724708 Gene

Post-translational modifications for LOC102724708 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724708 Gene

Domains & Families for LOC102724708 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724708 Gene

Function for LOC102724708 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724708 Gene

Localization for LOC102724708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724708 Gene

Pathways & Interactions for LOC102724708 Gene

PathCards logo

SuperPathways for LOC102724708 Gene

No Data Available

Interacting Proteins for LOC102724708 Gene

Gene Ontology (GO) - Biological Process for LOC102724708 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724708 Gene

Drugs & Compounds for LOC102724708 Gene

No Compound Related Data Available

Transcripts for LOC102724708 Gene

mRNA/cDNA for LOC102724708 Gene

(1) Additional mRNA sequences :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724708 Gene

No ASD Table

Relevant External Links for LOC102724708 Gene

GeneLoc Exon Structure for
LOC102724708

Expression for LOC102724708 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724708 Gene

Orthologs for LOC102724708 Gene

No data available for Orthologs and Evolution for LOC102724708 Gene

Paralogs for LOC102724708 Gene

No data available for Paralogs for LOC102724708 Gene

Variants for LOC102724708 Gene

Sequence variations from dbSNP and Humsavar for LOC102724708 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs114402678 benign, uncertain-significance, Febrile seizures, familial, 11, not specified 67,483,797(+) G/A genic_downstream_transcript_variant, intron_variant
rs1186379773 likely-benign, Febrile seizures, familial, 11 67,434,218(+) A/G genic_downstream_transcript_variant, intron_variant
rs138313759 uncertain-significance, benign, Temporal epilepsy, familial, not specified, Febrile seizures, familial, 11 67,434,104(+) T/A/C genic_downstream_transcript_variant, intron_variant
rs138798669 benign, Febrile seizures, familial, 11 67,484,792(+) A/G genic_downstream_transcript_variant, intron_variant
rs139145929 likely-pathogenic, Epilepsy 67,434,148(+) G/A genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724708 Gene

Disorders for LOC102724708 Gene

MalaCards: The human disease database

(3) MalaCards diseases for LOC102724708 Gene - From: GeneCards

- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC102724708: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724708 Gene

Publications for LOC102724708 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC102724708 Gene

Products for LOC102724708 Gene

Sources for LOC102724708 Gene

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