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Aliases for LOC102724660 Gene

Subcategory (RNA class) for LOC102724660 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724660 Gene

  • Uncharacterized LOC102724660 3

External Ids for LOC102724660 Gene

Previous GeneCards Identifiers for LOC102724660 Gene

  • GC07U903795
  • GC07P128463
  • GC07P128524
  • GC07P129018
  • GC07P128543
  • GC07P128561
  • GC07P128579
  • GC07P128596
  • GC07P128612
  • GC07P128634
  • GC07P128887
  • GC07P128976

Summaries for LOC102724660 Gene

GeneCards Summary for LOC102724660 Gene

LOC102724660 (Uncharacterized LOC102724660) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724660 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724660 Gene

Genomics for LOC102724660 Gene

GeneHancer (GH) Regulatory Elements for LOC102724660 Gene

Promoters and enhancers for LOC102724660 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J128448 Promoter/Enhancer 0.9 Ensembl dbSUPER 600.7 -1.9 -1884 1 ZFHX2 GATA3 LOC102724660 IMPDH1 ENSG00000242588 RNU7-54P GC07P129180
GH07J128453 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.0 4040 10 SP1 ZFX ELF3 CTCF MNT ZNF148 NKRF POLR2A MLLT1 CEBPG HILPDA PIR42289 ENSG00000240758 ENSG00000273184 METTL2B PRRT4 ENSG00000242588 ENSG00000243302 ENSG00000273270 ENSG00000272601
GH07J128446 Enhancer 0.7 ENCODE dbSUPER 0.7 -4.3 -4334 0.8 MNT NFIC RCOR1 ZNF592 ENSG00000230715 ENSG00000272601 ENSG00000242588 RNU7-54P LOC102724660 GC07P129180
GH07J128441 Enhancer 0.9 ENCODE dbSUPER 0.4 -7.1 -7087 3.7 ZNF687 IKZF1 FOSL2 IKZF2 ZNF143 CTBP1 ZFX SCRT2 RFX1 DPF2 RNU7-54P METTL2B IMPDH1 ENSG00000242588 OPN1SW LOC102724660 GC07P129180
GH07J128445 Enhancer 0.5 ENCODE dbSUPER 0.7 -4.9 -4863 0.2 HLF METTL2B RNU7-54P LOC102724660 GC07P129180
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724660 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724660 Gene

Genomic Locations for LOC102724660 Gene
chr7:128,450,785-128,469,400
(GRCh38/hg38)
Size:
18,616 bases
Orientation:
Plus strand

Genomic View for LOC102724660 Gene

Genes around LOC102724660 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724660 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724660 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724660 Gene

Proteins for LOC102724660 Gene

Post-translational modifications for LOC102724660 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724660 Gene

Domains & Families for LOC102724660 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724660 Gene

Function for LOC102724660 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724660 Gene

Localization for LOC102724660 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724660 Gene

Pathways & Interactions for LOC102724660 Gene

PathCards logo

SuperPathways for LOC102724660 Gene

No Data Available

Interacting Proteins for LOC102724660 Gene

Gene Ontology (GO) - Biological Process for LOC102724660 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724660 Gene

Drugs & Compounds for LOC102724660 Gene

No Compound Related Data Available

Transcripts for LOC102724660 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724660 Gene

No ASD Table

Relevant External Links for LOC102724660 Gene

GeneLoc Exon Structure for
LOC102724660

No data available for mRNA/cDNA for LOC102724660 Gene

Expression for LOC102724660 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724660 Gene

Orthologs for LOC102724660 Gene

No data available for Orthologs and Evolution for LOC102724660 Gene

Paralogs for LOC102724660 Gene

No data available for Paralogs for LOC102724660 Gene

Variants for LOC102724660 Gene

Sequence variations from dbSNP and Humsavar for LOC102724660 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000035689 -- 128,463,532(+) A/C genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000064060 -- 128,462,883(+) C/A/G/T genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000067319 -- 128,463,148(+) G/C genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000436544 -- 128,462,609(+) T/G genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000571520 -- 128,458,343(+) T/G genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724660 Gene

Disorders for LOC102724660 Gene

No disorders were found for LOC102724660 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724660 Gene

Publications for LOC102724660 Gene

No publications were found for LOC102724660 Gene.

No data available for External Links for LOC102724660 Gene

Products for LOC102724660 Gene

Sources for LOC102724660 Gene

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