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Aliases for LOC102724657 Gene

Aliases for LOC102724657 Gene

  • Uncharacterized LOC102724657 3 5
  • Uncharacterized Protein LOC102724657 3
  • Uncharacterized Protein 13
  • AC113348.1 5

External Ids for LOC102724657 Gene

Previous GeneCards Identifiers for LOC102724657 Gene

  • GC05U901966

Summaries for LOC102724657 Gene

GeneCards Summary for LOC102724657 Gene

LOC102724657 (Uncharacterized LOC102724657) is a Protein Coding gene.

Additional gene information for LOC102724657 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724657 Gene

Genomics for LOC102724657 Gene

GeneHancer (GH) Regulatory Elements for LOC102724657 Gene

Promoters and enhancers for LOC102724657 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J178695 Enhancer 0.3 Ensembl 0.4 +12.4 12385 2 ZNF680 ZNF354A CLK4 GRM6 LOC102724657 VN2R2P ENSG00000285978
GH05J178677 Enhancer 0.4 Ensembl 0.3 +30.8 30785 1.6 RFX5 ZNF664 ZNF354A CLK4 COL23A1 VN2R2P LOC102724657
GH05J178701 Enhancer 0.2 Ensembl 0.4 +7.5 7485 0.2 LOC102724657 ENSG00000285978 VN2R2P
GH05J178672 Enhancer 0.3 Ensembl 0.3 +36.5 36485 0.2 ZBTB48 CLK4 COL23A1 VN2R2P LOC102724657
GH05J178698 Enhancer 0.2 Ensembl 0.4 +10.3 10285 0.6 ZNF354A LOC102724657 ENSG00000285978 VN2R2P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724657 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724657 Gene

Genomic Locations for LOC102724657 Gene
chr5:178,691,534-178,708,586
(GRCh38/hg38)
Size:
17,053 bases
Orientation:
Minus strand

Genomic View for LOC102724657 Gene

Genes around LOC102724657 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724657 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724657 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724657 Gene

Proteins for LOC102724657 Gene

  • Protein details for LOC102724657 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A3B3IT52-A0A3B3IT52_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A3B3IT52

    Protein attributes for LOC102724657 Gene

    Size:
    213 amino acids
    Molecular mass:
    24520 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC102724657 Gene

Post-translational modifications for LOC102724657 Gene

No Post-translational modifications

Other Protein References for LOC102724657 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for LOC102724657 Gene

Domains & Families for LOC102724657 Gene

Protein Domains for LOC102724657 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LOC102724657: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724657 Gene

Function for LOC102724657 Gene

Phenotypes From GWAS Catalog for LOC102724657 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724657 Gene

Localization for LOC102724657 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724657 Gene

Pathways & Interactions for LOC102724657 Gene

PathCards logo

SuperPathways for LOC102724657 Gene

No Data Available

Interacting Proteins for LOC102724657 Gene

Gene Ontology (GO) - Biological Process for LOC102724657 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724657 Gene

Drugs & Compounds for LOC102724657 Gene

No Compound Related Data Available

Transcripts for LOC102724657 Gene

mRNA/cDNA for LOC102724657 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724657 Gene

No ASD Table

Relevant External Links for LOC102724657 Gene

GeneLoc Exon Structure for
LOC102724657

Expression for LOC102724657 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724657 Gene

Orthologs for LOC102724657 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for LOC102724657 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm12569 17 34
  • 56.89 (n)
Species where no ortholog for LOC102724657 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LOC102724657 Gene

ENSEMBL:
Gene Tree for LOC102724657 (if available)
TreeFam:
Gene Tree for LOC102724657 (if available)

Paralogs for LOC102724657 Gene

No data available for Paralogs for LOC102724657 Gene

Variants for LOC102724657 Gene

Sequence variations from dbSNP and Humsavar for LOC102724657 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000057 -- 178,695,516(-) C/G coding_sequence_variant, missense_variant
rs1000148617 -- 178,693,607(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000361024 -- 178,708,922(-) G/A upstream_transcript_variant
rs1000683304 -- 178,704,511(-) C/T intron_variant
rs1000789558 -- 178,704,880(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724657 Gene

Disorders for LOC102724657 Gene

No disorders were found for LOC102724657 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724657 Gene

Publications for LOC102724657 Gene

  1. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J … Rubin EM (Nature 2004) 13 58

No data available for External Links for LOC102724657 Gene

Products for LOC102724657 Gene

Sources for LOC102724657 Gene

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