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Aliases for LOC102724625 Gene

Subcategory (RNA class) for LOC102724625 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724625 Gene

  • Uncharacterized LOC102724625 3

External Ids for LOC102724625 Gene

Previous GeneCards Identifiers for LOC102724625 Gene

  • GC17U902062

Summaries for LOC102724625 Gene

GeneCards Summary for LOC102724625 Gene

LOC102724625 (Uncharacterized LOC102724625) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724625 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724625 Gene

Genomics for LOC102724625 Gene

GeneHancer (GH) Regulatory Elements for LOC102724625 Gene

Promoters and enhancers for LOC102724625 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J032097 Enhancer 0.3 Ensembl 600.7 -2.0 -1972 0.2 HIC1 LOC102724625 ENSG00000214708 ENSG00000264164 WDR45BP1
GH17J032083 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 +10.6 10628 3.4 ZNF143 PATZ1 HDAC2 HDGF PRDM4 ZNF189 BCOR ZNF335 KDM1A ZNF398 ENSG00000264164 COPRS RHOT1 ZNF207 GC17M032087 LOC102724625
GH17J032101 Enhancer 0.8 Ensembl ENCODE 0.4 -6.3 -6272 1.2 SP1 RXRA ZNF24 FOXA2 JUND MYNN YY1 RAD21 HNF4A MAX ENSG00000214708 RHOT1 LOC102724625 WDR45BP1
GH17J032111 Enhancer 0.9 ENCODE 0.4 -16.5 -16468 0.3 GTF2F1 ZSCAN21 CTCF SP7 SMARCA4 GLIS2 GMEB1 PKNOX1 ZNF600 ZIC2 WDR45BP1 ENSG00000263369 LOC102724625
GH17J032079 Enhancer 0.7 ENCODE 0.4 +15.2 15195 1.1 SP1 ZNF121 CSDE1 ZNF687 MLLT1 IKZF1 RFX1 PRDM10 IKZF2 LARP7 COPRS ENSG00000264164 LOC102724625 ENSG00000278867
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724625 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724625 Gene

Genomic Locations for LOC102724625 Gene
chr17:32,079,345-32,095,129
(GRCh38/hg38)
Size:
15,785 bases
Orientation:
Minus strand

Genomic View for LOC102724625 Gene

Genes around LOC102724625 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724625 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724625 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724625 Gene

Proteins for LOC102724625 Gene

Post-translational modifications for LOC102724625 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724625 Gene

Domains & Families for LOC102724625 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724625 Gene

Function for LOC102724625 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724625 Gene

Localization for LOC102724625 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724625 Gene

Pathways & Interactions for LOC102724625 Gene

PathCards logo

SuperPathways for LOC102724625 Gene

No Data Available

Interacting Proteins for LOC102724625 Gene

Gene Ontology (GO) - Biological Process for LOC102724625 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724625 Gene

Drugs & Compounds for LOC102724625 Gene

No Compound Related Data Available

Transcripts for LOC102724625 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724625 Gene

No ASD Table

Relevant External Links for LOC102724625 Gene

GeneLoc Exon Structure for
LOC102724625

No data available for mRNA/cDNA for LOC102724625 Gene

Expression for LOC102724625 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724625 Gene

Orthologs for LOC102724625 Gene

No data available for Orthologs and Evolution for LOC102724625 Gene

Paralogs for LOC102724625 Gene

No data available for Paralogs for LOC102724625 Gene

Variants for LOC102724625 Gene

Sequence variations from dbSNP and Humsavar for LOC102724625 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000269294 -- 32,087,686(-) A/G non_coding_transcript_variant
rs1000766438 -- 32,093,769(-) C/G upstream_transcript_variant
rs1001081431 -- 32,087,490(-) G/A downstream_transcript_variant
rs1001456867 -- 32,091,979(-) G/A/T upstream_transcript_variant
rs1001888676 -- 32,090,894(-) A/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724625 Gene

Disorders for LOC102724625 Gene

No disorders were found for LOC102724625 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724625 Gene

Publications for LOC102724625 Gene

No publications were found for LOC102724625 Gene.

No data available for External Links for LOC102724625 Gene

Products for LOC102724625 Gene

Sources for LOC102724625 Gene

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