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Aliases for LOC102724618 Gene

Subcategory (RNA class) for LOC102724618 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724618 Gene

  • Uncharacterized LOC102724618 3

External Ids for LOC102724618 Gene

Previous GeneCards Identifiers for LOC102724618 Gene

  • GC12U901860

Summaries for LOC102724618 Gene

GeneCards Summary for LOC102724618 Gene

LOC102724618 (Uncharacterized LOC102724618) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724618 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724618 Gene

Genomics for LOC102724618 Gene

GeneHancer (GH) Regulatory Elements for LOC102724618 Gene

Promoters and enhancers for LOC102724618 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J031958 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 -34.0 -33952 10.3 ZNF652 SP1 CC2D1A ZFX ELF3 NKRF MLLT1 RERE POLR2A GTF2F1 RESF1 DDX11-AS1 ENSG00000223722 BICD1 LOC105369725 LOC102724618
GH12J032005 Enhancer 1.2 Ensembl ENCODE 0.4 +9.0 9017 1.2 ZFX CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 BACH1 TRIM24 EGR1 ENSG00000257094 GC12P032002 LOC102724618
GH12J032016 Enhancer 1 Ensembl ENCODE 0.3 +20.6 20567 2.7 ZNF404 MZF1 ZNF680 ZNF560 ZNF547 ZBTB8A PRDM12 ZNF629 ZNF501 ZNF341 DDX11 ENSG00000257511 DDX11-AS1 SINHCAF DNM1L YARS2 BICD1 ENSG00000177340 RESF1 AMN1
GH12J031989 Enhancer 0.6 Ensembl ENCODE 0.4 -6.5 -6547 2 PKNOX1 CBFA2T3 RESF1 LOC102724618
GH12J032003 Enhancer 0.6 Ensembl 0.4 +6.3 6306 2.4 ZNF121 ZNF740 POLR2A ZNF766 BCOR ZBTB33 ZMYM3 ZBTB40 CBFA2T3 GC12P032002 GC12P032001 ENSG00000257094 LOC102724618
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724618 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724618 Gene

Genomic Locations for LOC102724618 Gene
chr12:31,996,895-32,017,487
(GRCh38/hg38)
Size:
20,593 bases
Orientation:
Plus strand

Genomic View for LOC102724618 Gene

Genes around LOC102724618 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724618 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724618 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724618 Gene

Proteins for LOC102724618 Gene

Post-translational modifications for LOC102724618 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724618 Gene

Domains & Families for LOC102724618 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724618 Gene

Function for LOC102724618 Gene

Phenotypes From GWAS Catalog for LOC102724618 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724618 Gene

Localization for LOC102724618 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724618 Gene

Pathways & Interactions for LOC102724618 Gene

PathCards logo

SuperPathways for LOC102724618 Gene

No Data Available

Interacting Proteins for LOC102724618 Gene

Gene Ontology (GO) - Biological Process for LOC102724618 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724618 Gene

Drugs & Compounds for LOC102724618 Gene

No Compound Related Data Available

Transcripts for LOC102724618 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724618 Gene

No ASD Table

Relevant External Links for LOC102724618 Gene

GeneLoc Exon Structure for
LOC102724618

No data available for mRNA/cDNA for LOC102724618 Gene

Expression for LOC102724618 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724618 Gene

Orthologs for LOC102724618 Gene

No data available for Orthologs and Evolution for LOC102724618 Gene

Paralogs for LOC102724618 Gene

No data available for Paralogs for LOC102724618 Gene

Variants for LOC102724618 Gene

Sequence variations from dbSNP and Humsavar for LOC102724618 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000082209 -- 32,017,397(+) TTT/TTTT intron_variant
rs1000134578 -- 32,017,775(+) T/C downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000164418 -- 32,035,241(+) C/A genic_downstream_transcript_variant, intron_variant
rs1000188045 -- 32,027,156(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000212883 -- 31,995,646(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724618 Gene

Disorders for LOC102724618 Gene

No disorders were found for LOC102724618 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724618 Gene

Publications for LOC102724618 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 58

No data available for External Links for LOC102724618 Gene

Products for LOC102724618 Gene

Sources for LOC102724618 Gene

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