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Aliases for LOC102724584 Gene

Subcategory (RNA class) for LOC102724584 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724584 Gene

  • Uncharacterized LOC102724584 3

External Ids for LOC102724584 Gene

Previous GeneCards Identifiers for LOC102724584 Gene

  • GC21U900550

Summaries for LOC102724584 Gene

GeneCards Summary for LOC102724584 Gene

LOC102724584 (Uncharacterized LOC102724584) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724584 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724584 Gene

Genomics for LOC102724584 Gene

GeneHancer (GH) Regulatory Elements for LOC102724584 Gene

Promoters and enhancers for LOC102724584 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J034833 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.7 -694 4.8 MNT CEBPG RERE NFIB AHR MAFK TFE3 SP1 PPARG ZNF644 ENSG00000286153 LOC102724584 LINC01426 KCNE1 RCAN1 GC21M034823
GH21J034843 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.7 8737 4.2 SP1 ZNF121 GTF2F1 ZNF687 ZSCAN21 SP7 RELA CREM MLLT1 MZF1 FAM243A RPS5P2 KCNE1 ENSG00000286153 LOC102724584 PIR39931 GC21M034865
GH21J034840 Enhancer 0.6 Ensembl dbSUPER 0.7 +4.2 4212 0.4 ZNF341 PRDM10 HNF4A LOC102724584 ENSG00000286153 PIR39931 GC21M034865
GH21J034857 Enhancer 0.9 Ensembl dbSUPER 0.3 +21.2 21170 2.3 PKNOX1 ZIC2 ZNF341 ZNF561 OSR2 KLF4 ZNF217 PRDM4 ZNF189 OVOL3 GC21M034865 PIR39931 ENSG00000286153 LOC102724584
GH21J034839 Enhancer 0.4 dbSUPER 0.7 +3.0 2983 1.6 ZFHX2 EGR2 LINC01426 ENSG00000286153 LOC102724584 PIR39931 GC21M034865
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724584 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724584 Gene

Genomic Locations for LOC102724584 Gene
chr21:34,836,589-34,848,498
(GRCh38/hg38)
Size:
11,910 bases
Orientation:
Plus strand

Genomic View for LOC102724584 Gene

Genes around LOC102724584 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724584 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724584 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724584 Gene

Proteins for LOC102724584 Gene

Post-translational modifications for LOC102724584 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724584 Gene

Domains & Families for LOC102724584 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724584 Gene

Function for LOC102724584 Gene

Phenotypes From GWAS Catalog for LOC102724584 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724584 Gene

Localization for LOC102724584 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724584 Gene

Pathways & Interactions for LOC102724584 Gene

PathCards logo

SuperPathways for LOC102724584 Gene

No Data Available

Interacting Proteins for LOC102724584 Gene

Gene Ontology (GO) - Biological Process for LOC102724584 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724584 Gene

Drugs & Compounds for LOC102724584 Gene

No Compound Related Data Available

Transcripts for LOC102724584 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724584 Gene

No ASD Table

Relevant External Links for LOC102724584 Gene

GeneLoc Exon Structure for
LOC102724584

No data available for mRNA/cDNA for LOC102724584 Gene

Expression for LOC102724584 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724584 Gene

Orthologs for LOC102724584 Gene

No data available for Orthologs and Evolution for LOC102724584 Gene

Paralogs for LOC102724584 Gene

No data available for Paralogs for LOC102724584 Gene

Variants for LOC102724584 Gene

Sequence variations from dbSNP and Humsavar for LOC102724584 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs762247645 uncertain-significance, Familial platelet disorder with associated myeloid malignancy 34,834,604(+) A/G upstream_transcript_variant
rs777320434 uncertain-significance, Familial platelet disorder with associated myeloid malignancy 34,834,592(+) T/A upstream_transcript_variant
rs1555890007 uncertain-significance, not specified 34,834,596(+) G/A upstream_transcript_variant
rs11702841 benign, not specified 34,834,635(+) G/A/T upstream_transcript_variant
rs1000001120 -- 34,838,090(+) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724584 Gene

Disorders for LOC102724584 Gene

No disorders were found for LOC102724584 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724584 Gene

Publications for LOC102724584 Gene

  1. Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. (PMID: 23551011) Zhao L … DeWan AT (Annals of human genetics 2013) 3 58

No data available for External Links for LOC102724584 Gene

Products for LOC102724584 Gene

Sources for LOC102724584 Gene

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