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Aliases for LOC102724580 Gene

Aliases for LOC102724580 Gene

  • Methylenetetrahydrofolate Dehydrogenase (NADP+ Dependent) 1 Like Pseudogene 3
  • Monofunctional C1-Tetrahydrofolate Synthase, Mitochondrial-Like 3

External Ids for LOC102724580 Gene

Previous GeneCards Identifiers for LOC102724580 Gene

  • GC09U902116

Summaries for LOC102724580 Gene

GeneCards Summary for LOC102724580 Gene

LOC102724580 (Methylenetetrahydrofolate Dehydrogenase (NADP+ Dependent) 1 Like Pseudogene) is a Pseudogene. An important paralog of this gene is LOC101929583.

Additional gene information for LOC102724580 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724580 Gene

Genomics for LOC102724580 Gene

GeneHancer (GH) Regulatory Elements for LOC102724580 Gene

Promoters and enhancers for LOC102724580 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J040497 Promoter 0.5 Ensembl 600.7 +0.4 436 1 LOC102724580 ENSG00000274067 ENSG00000184906 AQP7P5 LOC101929959
GH09J040499 Promoter 0.5 Ensembl 0.7 +2.0 2036 0.2 AQP7P5 LOC102724580 ENSG00000184906 LOC101929959
GH09J040518 Enhancer 0.2 Ensembl 0.3 +21.4 21436 1.4 LOC102724580 AQP7P5 ENSG00000184906 LOC101929959
GH09J040629 Enhancer 0.2 Ensembl 0.1 +131.8 131836 0.6 ENSG00000276266 IGKV1OR9-2 LOC102724580
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724580 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724580 Gene

Genomic Locations for LOC102724580 Gene
chr9:40,497,865-40,635,468
(GRCh38/hg38)
Size:
137,604 bases
Orientation:
Plus strand

Genomic View for LOC102724580 Gene

Genes around LOC102724580 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724580 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724580 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724580 Gene

Proteins for LOC102724580 Gene

Post-translational modifications for LOC102724580 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724580 Gene

Domains & Families for LOC102724580 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724580 Gene

Function for LOC102724580 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724580 Gene

Localization for LOC102724580 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724580 Gene

Pathways & Interactions for LOC102724580 Gene

PathCards logo

SuperPathways for LOC102724580 Gene

No Data Available

Interacting Proteins for LOC102724580 Gene

Gene Ontology (GO) - Biological Process for LOC102724580 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724580 Gene

Drugs & Compounds for LOC102724580 Gene

No Compound Related Data Available

Transcripts for LOC102724580 Gene

mRNA/cDNA for LOC102724580 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724580 Gene

No ASD Table

Relevant External Links for LOC102724580 Gene

GeneLoc Exon Structure for
LOC102724580

Expression for LOC102724580 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724580 Gene

Orthologs for LOC102724580 Gene

No data available for Orthologs and Evolution for LOC102724580 Gene

Paralogs for LOC102724580 Gene

Paralogs for LOC102724580 Gene

genes like me logo Genes that share paralogs with LOC102724580: view

Variants for LOC102724580 Gene

Sequence variations from dbSNP and Humsavar for LOC102724580 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1014750373 -- 40,529,394(+) A/G intron_variant
rs1020412913 -- 40,529,378(+) T/C intron_variant
rs1037807354 -- 40,529,083(+) G/A intron_variant
rs111866489 -- 40,535,134(+) G/C intron_variant
rs1156263122 -- 40,527,679(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724580 Gene

Disorders for LOC102724580 Gene

No disorders were found for LOC102724580 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724580 Gene

Publications for LOC102724580 Gene

No publications were found for LOC102724580 Gene.

No data available for External Links for LOC102724580 Gene

Products for LOC102724580 Gene

Sources for LOC102724580 Gene

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