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Aliases for LOC102724579 Gene

Subcategory (RNA class) for LOC102724579 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724579 Gene

  • Uncharacterized LOC102724579 3

External Ids for LOC102724579 Gene

Previous GeneCards Identifiers for LOC102724579 Gene

  • GC02U902911

Summaries for LOC102724579 Gene

GeneCards Summary for LOC102724579 Gene

LOC102724579 (Uncharacterized LOC102724579) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724579 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724579 Gene

Genomics for LOC102724579 Gene

GeneHancer (GH) Regulatory Elements for LOC102724579 Gene

Promoters and enhancers for LOC102724579 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J085213 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE 600.7 +2.0 1977 4.2 CTCF IKZF1 POLR2A RXRA PRDM10 EZH2 RNF2 RAD21 SMC3 RCOR1 LOC102724579 TGOLN2 USP39 PIR39171 TCF7L1
GH02J085220 Enhancer 0.5 Ensembl ENCODE 0.4 +7.5 7502 1.2 POLR2A TCF7L1 LOC102724579 PIR39171
GH02J085211 Enhancer 0.2 Ensembl 0.7 -3.0 -3009 0.8 LOC102724579 RNU6-674P TCF7L1
GH02J085209 Enhancer 0.2 Ensembl 0.7 -4.3 -4309 0.2 RNU6-674P LOC102724579 TCF7L1
GH02J085210 Enhancer 0.2 Ensembl 0.7 -3.9 -3909 0.2 TCF7L1 LOC102724579 RNU6-674P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724579 Gene

Genomic Locations for LOC102724579 Gene
chr2:85,213,610-85,218,191
(GRCh38/hg38)
Size:
4,582 bases
Orientation:
Plus strand

Genomic View for LOC102724579 Gene

Genes around LOC102724579 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724579 Gene

Proteins for LOC102724579 Gene

Post-translational modifications for LOC102724579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724579 Gene

Domains & Families for LOC102724579 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724579 Gene

Function for LOC102724579 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724579 Gene

Localization for LOC102724579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724579 Gene

Pathways & Interactions for LOC102724579 Gene

PathCards logo

SuperPathways for LOC102724579 Gene

No Data Available

Interacting Proteins for LOC102724579 Gene

Gene Ontology (GO) - Biological Process for LOC102724579 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724579 Gene

Drugs & Compounds for LOC102724579 Gene

No Compound Related Data Available

Transcripts for LOC102724579 Gene

mRNA/cDNA for LOC102724579 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724579 Gene

No ASD Table

Relevant External Links for LOC102724579 Gene

GeneLoc Exon Structure for
LOC102724579

Expression for LOC102724579 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724579 Gene

Orthologs for LOC102724579 Gene

No data available for Orthologs and Evolution for LOC102724579 Gene

Paralogs for LOC102724579 Gene

No data available for Paralogs for LOC102724579 Gene

Variants for LOC102724579 Gene

Sequence variations from dbSNP and Humsavar for LOC102724579 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000300421 -- 85,215,616(+) C/T intron_variant
rs1000472996 -- 85,213,857(+) C/G intron_variant
rs1000563957 -- 85,216,009(+) G/T intron_variant
rs1000972273 -- 85,215,013(+) TAGT/TAGTAGT intron_variant
rs1001539593 -- 85,216,368(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724579 Gene

Disorders for LOC102724579 Gene

No disorders were found for LOC102724579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724579 Gene

Publications for LOC102724579 Gene

No publications were found for LOC102724579 Gene.

No data available for External Links for LOC102724579 Gene

Products for LOC102724579 Gene

Sources for LOC102724579 Gene

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