LOC102724551 Gene (RNA Gene)

Uncharacterized LOC102724551

GC05M174081
GIFtS:
4

Aliases for LOC102724551 Gene

Subcategory (RNA class) for LOC102724551 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724551 Gene

  • Uncharacterized LOC102724551 3

External Ids for LOC102724551 Gene

Previous GeneCards Identifiers for LOC102724551 Gene

  • GC05U902002

Summaries for LOC102724551 Gene

GeneCards Summary for LOC102724551 Gene

LOC102724551 (Uncharacterized LOC102724551) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724551 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724551 Gene

Genomics for LOC102724551 Gene

GeneHancer (GH) Regulatory Elements for LOC102724551 Gene

Promoters and enhancers for LOC102724551 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05J174084 Enhancer 0.3 dbSUPER 750.6 +1.8 1836 0.8 RCOR1 FOS ENSG00000253447 LOC102724551 ENSG00000253244 NSG2
GH05J174073 Enhancer 0.4 dbSUPER 0.4 +12.1 12053 1.1 ATF7 CREB1 ATF2 PRDM10 NSG2 LOC102724551 ENSG00000253244
GH05J174065 Enhancer 0.5 FANTOM5 dbSUPER 0.3 +21.4 21369 0.4 ZNF623 NSG2 ENSG00000253244 LOC102724551
GH05J174067 Enhancer 0.2 dbSUPER 0.4 +18.9 18869 1.3 ENSG00000253244 LOC102724551 NSG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724551 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724551 Gene

Genomic Locations for LOC102724551 Gene
chr5:174,075,178-174,086,601
(GRCh38/hg38)
Size:
11,424 bases
Orientation:
Minus strand

Genomic View for LOC102724551 Gene

Genes around LOC102724551 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724551 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724551 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC102724551 Gene

Proteins for LOC102724551 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC102724551 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724551 Gene

Domains & Families for LOC102724551 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724551 Gene

Function for LOC102724551 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724551 Gene

Localization for LOC102724551 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724551 Gene

Pathways & Interactions for LOC102724551 Gene

PathCards logo

SuperPathways for LOC102724551 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724551 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724551 Gene

Drugs & Compounds for LOC102724551 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC102724551 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724551 Gene

No ASD Table

Relevant External Links for LOC102724551 Gene

GeneLoc Exon Structure for
LOC102724551

No data available for mRNA/cDNA for LOC102724551 Gene

Expression for LOC102724551 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102724551 Gene

mRNA expression in normal human tissues for LOC102724551 Gene
mRNA expression by GTEx for LOC102724551 Gene
genes like me logo Genes that share expression patterns with LOC102724551: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724551 Gene

Orthologs for LOC102724551 Gene

No data available for Orthologs and Evolution for LOC102724551 Gene

Paralogs for LOC102724551 Gene

No data available for Paralogs for LOC102724551 Gene

Variants for LOC102724551 Gene

Sequence variations from dbSNP and Humsavar for LOC102724551 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000025884 -- 174,076,022(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000219181 -- 174,072,742(-) G/A downstream_transcript_variant
rs1000281970 -- 174,077,111(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000352032 -- 174,077,442(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000631115 -- 174,083,736(-) G/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724551 Gene

Disorders for LOC102724551 Gene

No disorders were found for LOC102724551 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724551 Gene

Publications for LOC102724551 Gene

No publications were found for LOC102724551 Gene.

No data available for External Links for LOC102724551 Gene

Products for LOC102724551 Gene

Sources for LOC102724551 Gene