Aliases for LOC102724528 Gene

Subcategory (RNA class) for LOC102724528 Gene

ncRNA

Aliases for LOC102724528 Gene

  • Uncharacterized LOC102724528 3

External Ids for LOC102724528 Gene

Previous GeneCards Identifiers for LOC102724528 Gene

  • GC01U904071

Summaries for LOC102724528 Gene

GeneCards Summary for LOC102724528 Gene

LOC102724528 (Uncharacterized LOC102724528) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724528 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724528 Gene

Genomics for LOC102724528 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724528 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J172455 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 600.7 -0.2 -231 3.4 LEF1 IKZF1 ZNF7 JUND MTA2 PKNOX1 ZNF24 ZNF740 DPF2 HDAC1 PIGC LOC102724528 SUCO C1orf105 piR-56133-013
GH01J172443 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +12.7 12695 2 GATAD2A CTCF HNRNPL PRDM10 ZNF629 LEF1 NFKBIZ POLR2A JUND LARP7 PIGC lnc-PIGC-2 MYOC MIR199A2 LOC102724528 lnc-TNFSF18-5 C1orf105
GH01J172448 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.2 5199 6.4 CEBPG CREB1 GATAD2A CTCF REST TFE3 ZNF512 LEF1 IKZF1 NFKBIZ C1orf105 PIGC SUCO EEF1AKNMT LOC102724528
GH01J172470 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -18.7 -18728 11.2 GATAD2A TFE3 LEF1 SOX13 NFKBIZ RCOR2 FOXA1 RXRB REST IRF2 C1orf105 PIGC SUCO EEF1AKNMT RNU6-157P LOC102724528 piR-56133-013
GH01J172466 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -10.7 -10735 2.3 GATAD2A RXRB CEBPA SOX13 SP1 ZBTB26 FOXA2 JUN MAFF MAFK SUCO PIGC C1orf105 RNU6-157P LOC102724528 piR-56133-013
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724528 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102724528 Gene

Genomic Locations for LOC102724528 Gene
chr1:172,393,992-172,456,470
(GRCh38/hg38)
Size:
62,479 bases
Orientation:
Minus strand

Genomic View for LOC102724528 Gene

Genes around LOC102724528 on UCSC Golden Path with GeneCards custom track
LOC102724528 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC102724528 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724528 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724528 Gene

Proteins for LOC102724528 Gene

Post-translational modifications for LOC102724528 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724528 Gene

Domains & Families for LOC102724528 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724528 Gene

Function for LOC102724528 Gene

Phenotypes From GWAS Catalog for LOC102724528 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724528 Gene

Localization for LOC102724528 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724528 Gene

Pathways & Interactions for LOC102724528 Gene

PathCards logo

SuperPathways for LOC102724528 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724528 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724528 Gene

Drugs & Compounds for LOC102724528 Gene

No Compound Related Data Available

Transcripts for LOC102724528 Gene

LOC102724528 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724528 Gene

No ASD Table

Relevant External Links for LOC102724528 Gene

GeneLoc Exon Structure for
LOC102724528

No data available for mRNA/cDNA for LOC102724528 Gene

Expression for LOC102724528 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724528 Gene

Orthologs for LOC102724528 Gene

No data available for Orthologs and Evolution for LOC102724528 Gene

Paralogs for LOC102724528 Gene

No data available for Paralogs for LOC102724528 Gene

Variants for LOC102724528 Gene

Additional dbSNP identifiers (rs#s) for LOC102724528 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724528 Gene

Disorders for LOC102724528 Gene

No disorders were found for LOC102724528 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724528 Gene

Publications for LOC102724528 Gene

  1. Genetic loci associated with circulating levels of very long-chain saturated fatty acids. (PMID: 25378659) Lemaitre RN … Friedlander Y (Journal of lipid research 2015) 3
  2. Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. (PMID: 20935629) Heid IM … Lindgren CM (Nature genetics 2010) 3

No data available for Mastermind for LOC102724528 Gene

Products for LOC102724528 Gene

Sources for LOC102724528 Gene