Aliases for LOC102724517 Gene

Subcategory (RNA class) for LOC102724517 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724517 Gene

  • Uncharacterized LOC102724517 3

External Ids for LOC102724517 Gene

Previous GeneCards Identifiers for LOC102724517 Gene

  • GC17U902044

Summaries for LOC102724517 Gene

GeneCards Summary for LOC102724517 Gene

LOC102724517 (Uncharacterized LOC102724517) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724517 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724517 Gene

Genomics for LOC102724517 Gene

GeneHancer (GH) Regulatory Elements for LOC102724517 Gene

Promoters and enhancers for LOC102724517 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028040 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -0.5 -539 4.8 ZNF24 SP1 ZBTB40 POLR2A CEBPZ ATF1 FOS CREB1 ZNF362 NFYC NLK LOC105371709 LOC102724517 SUPT6H PHF12 ITM2BP1 SDF2 SEZ6 TMEM199 LOC101927018
GH17J028045 Promoter 0.6 Ensembl 0.6 +2.2 2161 0.2 TRIM24 ZNF316 USF1 TRIM28 ENSG00000202389 ENSG00000251818 LOC102724517 NLK lnc-TMEM97-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724517 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724517 Gene

Genomic Locations for LOC102724517 Gene
chr17:28,043,340-28,048,926
(GRCh38/hg38)
Size:
5,587 bases
Orientation:
Plus strand

Genomic View for LOC102724517 Gene

Genes around LOC102724517 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724517 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724517 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724517 Gene

Proteins for LOC102724517 Gene

Post-translational modifications for LOC102724517 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724517 Gene

Domains & Families for LOC102724517 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724517 Gene

Function for LOC102724517 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724517 Gene

Localization for LOC102724517 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724517 Gene

Pathways & Interactions for LOC102724517 Gene

PathCards logo

SuperPathways for LOC102724517 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724517 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724517 Gene

Drugs & Compounds for LOC102724517 Gene

No Compound Related Data Available

Transcripts for LOC102724517 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724517 Gene

No ASD Table

Relevant External Links for LOC102724517 Gene

GeneLoc Exon Structure for
LOC102724517

No data available for mRNA/cDNA for LOC102724517 Gene

Expression for LOC102724517 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724517 Gene

Orthologs for LOC102724517 Gene

No data available for Orthologs and Evolution for LOC102724517 Gene

Paralogs for LOC102724517 Gene

No data available for Paralogs for LOC102724517 Gene

Variants for LOC102724517 Gene

Sequence variations from dbSNP and Humsavar for LOC102724517 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000918795 -- 28,045,128(+) C/A upstream_transcript_variant
rs1001034132 -- 28,043,775(+) T/C upstream_transcript_variant
rs1003150346 -- 28,048,003(+) G/A non_coding_transcript_variant
rs1003466560 -- 28,048,328(+) T/C non_coding_transcript_variant
rs1003779347 -- 28,047,855(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724517 Gene

Disorders for LOC102724517 Gene

No disorders were found for LOC102724517 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724517 Gene

Publications for LOC102724517 Gene

No publications were found for LOC102724517 Gene.

No data available for External Links for LOC102724517 Gene

Products for LOC102724517 Gene

Sources for LOC102724517 Gene