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Aliases for LOC102724484 Gene

Subcategory (RNA class) for LOC102724484 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724484 Gene

  • Uncharacterized LOC102724484 3

External Ids for LOC102724484 Gene

Summaries for LOC102724484 Gene

GeneCards Summary for LOC102724484 Gene

LOC102724484 (Uncharacterized LOC102724484) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724484 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724484 Gene

Genomics for LOC102724484 Gene

GeneHancer (GH) Regulatory Elements for LOC102724484 Gene

Promoters and enhancers for LOC102724484 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J029206 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 +1.1 1068 3.4 ELF3 MNT CEBPG RERE TFE3 SP1 PPARG SP5 ZNF644 KAT8 ENSG00000235669 LOC102724484 CPVL CHN2 ENSG00000285162 GC07M029201
GH07J029202 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +6.4 6369 5.6 CEBPG SP1 ZNF384 ZNF644 PKNOX1 RXRA CEBPA GATAD2A RXRB ZSCAN4 ENSG00000235669 CPVL LOC102724484 CHN2 ENSG00000285162 GC07M029201
GH07J029205 Enhancer 0.4 ENCODE dbSUPER 0.7 +3.2 3218 0.4 ENSG00000235669 LOC102724484 CPVL CHN2 ENSG00000285162 GC07M029201
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724484 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724484 Gene

Genomic Locations for LOC102724484 Gene
chr7:29,199,040-29,208,970
(GRCh38/hg38)
Size:
9,931 bases
Orientation:
Minus strand

Genomic View for LOC102724484 Gene

Genes around LOC102724484 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724484 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724484 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724484 Gene

Proteins for LOC102724484 Gene

Post-translational modifications for LOC102724484 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724484 Gene

Domains & Families for LOC102724484 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724484 Gene

Function for LOC102724484 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724484 Gene

Localization for LOC102724484 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724484 Gene

Pathways & Interactions for LOC102724484 Gene

PathCards logo

SuperPathways for LOC102724484 Gene

No Data Available

Interacting Proteins for LOC102724484 Gene

Gene Ontology (GO) - Biological Process for LOC102724484 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724484 Gene

Drugs & Compounds for LOC102724484 Gene

No Compound Related Data Available

Transcripts for LOC102724484 Gene

mRNA/cDNA for LOC102724484 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724484 Gene

No ASD Table

Relevant External Links for LOC102724484 Gene

GeneLoc Exon Structure for
LOC102724484

Expression for LOC102724484 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724484 Gene

Orthologs for LOC102724484 Gene

No data available for Orthologs and Evolution for LOC102724484 Gene

Paralogs for LOC102724484 Gene

No data available for Paralogs for LOC102724484 Gene

Variants for LOC102724484 Gene

Sequence variations from dbSNP and Humsavar for LOC102724484 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000063784 -- 29,199,392(-) T/G non_coding_transcript_variant
rs1000257503 -- 29,206,482(-) A/G/T intron_variant
rs1000503761 -- 29,200,601(-) C/T intron_variant
rs1000683055 -- 29,207,085(-) A/G intron_variant
rs1000713669 -- 29,206,804(-) C/A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724484 Gene

Variant ID Type Subtype PubMed ID
dgv11248n54 CNV gain 21841781
esv2761314 CNV gain 21179565
esv3612685 CNV loss 21293372
nsv1019174 CNV gain 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724484 Gene

Disorders for LOC102724484 Gene

No disorders were found for LOC102724484 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724484 Gene

Publications for LOC102724484 Gene

No publications were found for LOC102724484 Gene.

No data available for External Links for LOC102724484 Gene

Products for LOC102724484 Gene

Sources for LOC102724484 Gene

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