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Aliases for LOC102724474 Gene

Subcategory (RNA class) for LOC102724474 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724474 Gene

  • Uncharacterized LOC102724474 3 5
  • WAS/WASL-Interacting Protein Family Member 2-Like 3
  • AL137002.2 5

External Ids for LOC102724474 Gene

Previous GeneCards Identifiers for LOC102724474 Gene

  • GC13U901067

Summaries for LOC102724474 Gene

GeneCards Summary for LOC102724474 Gene

LOC102724474 (Uncharacterized LOC102724474) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724474 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724474 Gene

Genomics for LOC102724474 Gene

GeneHancer (GH) Regulatory Elements for LOC102724474 Gene

Promoters and enhancers for LOC102724474 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J113152 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE 600.7 +0.4 393 3.4 ZFX ZNF148 POLR2A MAFK TFE3 SP1 PPARG SP5 ZNF639 EGR1 PROZ LOC102724474 PCID2 TUBGCP3 F10-AS1 KARSP2 F10 DCUN1D2-AS CUL4A ATP11A
GH13J113138 Enhancer 1.2 Ensembl ENCODE 0.4 +14.7 14737 0.9 ZNF652 ELF3 ZKSCAN8 MNT CEBPG RERE TFE3 SP1 HNF1A PPARG F7 GRTP1-AS1 GRTP1 F10 KARSP2 LOC102724474 GC13M113076
GH13J113151 Promoter 0.5 Ensembl 0.7 +2.3 2301 0.2 F10-AS1 KARSP2 F10 LOC102724474 GC13M113076
GH13J113137 Enhancer 0.7 Ensembl ENCODE 0.4 +16.0 15953 0.9 SP1 JUND RXRA ATF3 F7 GRTP1-AS1 GRTP1 KARSP2 LOC102724474 F10 GC13M113076
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724474 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724474 Gene

Genomic Locations for LOC102724474 Gene
chr13:113,149,432-113,154,002
(GRCh38/hg38)
Size:
4,571 bases
Orientation:
Minus strand

Genomic View for LOC102724474 Gene

Genes around LOC102724474 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724474 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724474 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724474 Gene

Proteins for LOC102724474 Gene

Post-translational modifications for LOC102724474 Gene

No Post-translational modifications

Other Protein References for LOC102724474 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC102724474 Gene

Domains & Families for LOC102724474 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724474 Gene

Function for LOC102724474 Gene

Phenotypes From GWAS Catalog for LOC102724474 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724474 Gene

Localization for LOC102724474 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724474 Gene

Pathways & Interactions for LOC102724474 Gene

PathCards logo

SuperPathways for LOC102724474 Gene

No Data Available

Interacting Proteins for LOC102724474 Gene

Gene Ontology (GO) - Biological Process for LOC102724474 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724474 Gene

Drugs & Compounds for LOC102724474 Gene

No Compound Related Data Available

Transcripts for LOC102724474 Gene

mRNA/cDNA for LOC102724474 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724474 Gene

No ASD Table

Relevant External Links for LOC102724474 Gene

GeneLoc Exon Structure for
LOC102724474

Expression for LOC102724474 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724474 Gene

Orthologs for LOC102724474 Gene

Evolution for LOC102724474 Gene

ENSEMBL:
Gene Tree for LOC102724474 (if available)
TreeFam:
Gene Tree for LOC102724474 (if available)

No data available for Orthologs for LOC102724474 Gene

Paralogs for LOC102724474 Gene

No data available for Paralogs for LOC102724474 Gene

Variants for LOC102724474 Gene

Sequence variations from dbSNP and Humsavar for LOC102724474 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000771289 -- 113,155,970(-) C/T upstream_transcript_variant
rs1000984704 -- 113,151,031(-) T/C intron_variant
rs1001721530 -- 113,154,918(-) C/G upstream_transcript_variant
rs1001773120 -- 113,152,210(-) C/T intron_variant
rs1002634341 -- 113,153,501(-) G/C coding_sequence_variant, missense_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724474 Gene

Disorders for LOC102724474 Gene

No disorders were found for LOC102724474 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724474 Gene

Publications for LOC102724474 Gene

No publications were found for LOC102724474 Gene.

No data available for External Links for LOC102724474 Gene

Products for LOC102724474 Gene

Sources for LOC102724474 Gene

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