Aliases for LOC102724467 Gene

Data sources for LOC102724467 Gene:

Subcategory (RNA class) for LOC102724467 Gene

lncRNA

Aliases for LOC102724467 Gene

External Ids for LOC102724467 Gene

Summaries for LOC102724467 Gene

GeneCards Summary for LOC102724467 Gene

LOC102724467 (Uncharacterized LOC102724467) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC102724467 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724467 Gene

Genomics for LOC102724467 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724467 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724467 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102724467 Gene

Latest Assembly
chr16:87,766,262-87,779,342
(GRCh38/hg38)
Size:
13,081 bases
Orientation:
Minus strand

Previous Assembly
chr16:87,799,937-87,812,754
(GRCh37/hg19 by Entrez Gene)
Size:
12,818 bases
Orientation:
Minus strand

Genomic View for LOC102724467 Gene

Genes around LOC102724467 on UCSC Golden Path with GeneCards custom track
LOC102724467 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC102724467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724467 Gene

Proteins for LOC102724467 Gene

Post-translational modifications for LOC102724467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724467 Gene

Domains & Families for LOC102724467 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724467 Gene

Function for LOC102724467 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724467 Gene

Localization for LOC102724467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724467 Gene

Pathways & Interactions for LOC102724467 Gene

PathCards logo

SuperPathways for LOC102724467 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724467 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724467 Gene

Drugs & Compounds for LOC102724467 Gene

No Compound Related Data Available

Transcripts for LOC102724467 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC102724467 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075C3E1_9606 lncRNA 771 4

RefSeq: NR_120309,

LncBook: HSALNT0235154,

LNCipedia: lnc-KLHDC4-1:6,

NONCODE: NONHSAT174194.1,

URS0000D56D30_9606 lncRNA 3787 2

LncBook: HSALNT0235155,

LNCipedia: lnc-KLHDC4-1:9,

URS0000D591E5_9606 lncRNA 2799 2

LncBook: HSALNT0235156,

LNCipedia: lnc-KLHDC4-1:11,

URS00009BB029_9606 lncRNA 2733 2

LNCipedia: lnc-KLHDC4-1:5,

NONCODE: NONHSAT144324.2,

URS00008B3D23_9606 lncRNA 685 2

LNCipedia: lnc-KLHDC4-1:2,

NONCODE: NONHSAT144323.2,

LOC102724467 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC102724467 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724467 Gene

No ASD Table

Relevant External Links for LOC102724467 Gene

GeneLoc Exon Structure for
LOC102724467

Expression for LOC102724467 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC102724467 Gene

genes like me logo Genes that share expression patterns with LOC102724467: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724467 Gene

Orthologs for LOC102724467 Gene

No data available for Orthologs and Evolution for LOC102724467 Gene

Paralogs for LOC102724467 Gene

No data available for Paralogs for LOC102724467 Gene

Variants for LOC102724467 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC102724467 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC102724467 Gene

Variant ID Type Subtype PubMed ID
dgv3062n100 CNV loss 25217958
esv2761934 CNV loss 21179565
esv3639528 CNV loss 21293372
nsv1061977 CNV loss 25217958
nsv1062946 CNV gain 25217958
nsv1160441 CNV deletion 26073780
nsv457616 CNV gain 19166990
nsv573536 CNV gain 21841781
nsv573538 CNV loss 21841781
nsv833322 CNV loss 17160897

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC102724467 Gene

Disorders for LOC102724467 Gene

No disorders were found for LOC102724467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724467 Gene

Publications for LOC102724467 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LOC102724467 Gene

Products for LOC102724467 Gene

Sources for LOC102724467 Gene