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Aliases for LOC102724465 Gene

Subcategory (RNA class) for LOC102724465 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724465 Gene

  • Uncharacterized LOC102724465 3

External Ids for LOC102724465 Gene

Previous GeneCards Identifiers for LOC102724465 Gene

  • GC15U901760

Summaries for LOC102724465 Gene

GeneCards Summary for LOC102724465 Gene

LOC102724465 (Uncharacterized LOC102724465) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724465 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724465 Gene

Genomics for LOC102724465 Gene

GeneHancer (GH) Regulatory Elements for LOC102724465 Gene

Promoters and enhancers for LOC102724465 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J087498 Enhancer 0.4 Ensembl 0.7 +3.0 3007 0.4 MAFK ZNF316 RNU6-185P LOC102724465 GC15M087475 ENSG00000259560
GH15J087477 Enhancer 0.7 ENCODE 0.3 +23.8 23841 1.4 PRDM1 FOSL2 RFX1 CTBP1 JUND BMI1 FOSL1 ZNF217 DPF2 ELF1 RNU6-185P GC15M087475 LOC102724465 ENSG00000259560
GH15J087495 Enhancer 0.2 Ensembl 0.4 +5.6 5606 1.2 RNU6-185P LOC102724465 GC15M087475 ENSG00000259560
GH15J087489 Enhancer 0.2 Ensembl 0.4 +12.0 12006 0.4 LOC102724465 GC15M087475 RNU6-185P ENSG00000259560
GH15J087434 Enhancer 0.2 Ensembl 0.2 +67.3 67306 0.6 GC15P087431 GC15M087442 LOC102724465 ENSG00000259560
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724465 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724465 Gene

Genomic Locations for LOC102724465 Gene
chr15:87,429,904-87,501,807
(GRCh38/hg38)
Size:
71,904 bases
Orientation:
Minus strand

Genomic View for LOC102724465 Gene

Genes around LOC102724465 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724465 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724465 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724465 Gene

Proteins for LOC102724465 Gene

Post-translational modifications for LOC102724465 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724465 Gene

Domains & Families for LOC102724465 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724465 Gene

Function for LOC102724465 Gene

Phenotypes From GWAS Catalog for LOC102724465 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724465 Gene

Localization for LOC102724465 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724465 Gene

Pathways & Interactions for LOC102724465 Gene

PathCards logo

SuperPathways for LOC102724465 Gene

No Data Available

Interacting Proteins for LOC102724465 Gene

Gene Ontology (GO) - Biological Process for LOC102724465 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724465 Gene

Drugs & Compounds for LOC102724465 Gene

No Compound Related Data Available

Transcripts for LOC102724465 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724465 Gene

No ASD Table

Relevant External Links for LOC102724465 Gene

GeneLoc Exon Structure for
LOC102724465

No data available for mRNA/cDNA for LOC102724465 Gene

Expression for LOC102724465 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724465 Gene

Orthologs for LOC102724465 Gene

No data available for Orthologs and Evolution for LOC102724465 Gene

Paralogs for LOC102724465 Gene

No data available for Paralogs for LOC102724465 Gene

Variants for LOC102724465 Gene

Sequence variations from dbSNP and Humsavar for LOC102724465 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000056738 -- 87,477,281(-) T/C intron_variant
rs1000064063 -- 87,443,577(-) C/T intron_variant
rs1000091470 -- 87,493,561(-) T/C intron_variant
rs1000164511 -- 87,467,448(-) G/A intron_variant
rs1000165792 -- 87,439,765(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724465 Gene

Disorders for LOC102724465 Gene

No disorders were found for LOC102724465 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724465 Gene

Publications for LOC102724465 Gene

  1. Genetics of coronary artery calcification among African Americans, a meta-analysis. (PMID: 23870195) Wojczynski MK … Reilly MP (BMC medical genetics 2013) 3 58

No data available for External Links for LOC102724465 Gene

Products for LOC102724465 Gene

Sources for LOC102724465 Gene

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