Aliases for LOC102724458 Gene

Subcategory (RNA class) for LOC102724458 Gene

ncRNA

Aliases for LOC102724458 Gene

  • Uncharacterized LOC102724458 3

External Ids for LOC102724458 Gene

Previous GeneCards Identifiers for LOC102724458 Gene

  • GC05U901965

Summaries for LOC102724458 Gene

GeneCards Summary for LOC102724458 Gene

LOC102724458 (Uncharacterized LOC102724458) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724458 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724458 Gene

Genomics for LOC102724458 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724458 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J163703 Enhancer 0.6 Ensembl ENCODE 0.7 -3.3 -3349 3.7 JUND JUN SMARCA4 NFE2L2 LOC102724458 lnc-MAT2B-1-002 MN298114-192 lnc-MAT2B-1-001 MAT2B
GH05J163697 Enhancer 0.7 Ensembl ENCODE 0.4 -12.6 -12569 0.8 CREB1 CTCF FOXA1 RAD21 RUNX3 SMC3 RFX5 ZNF654 ZNF143 SMARCA4 LOC102724458 lnc-MAT2B-1-002 MN298114-192 lnc-MAT2B-1-001 MAT2B
GH05J163730 Enhancer 0.4 Ensembl 0.4 +21.3 21331 0.2 FOXA1 PKNOX1 PRDM1 piR-40348-048 LOC102724458 ENSG00000224012 lnc-NUDCD2-8 MN298114-192 lnc-MAT2B-1-001 MAT2B
GH05J163661 Enhancer 0.5 Ensembl ENCODE 0.3 -48.4 -48410 2.7 CHD2 GATA2 lnc-MAT2B-1-002 MN298114-192 LOC102724458 lnc-MAT2B-1-001 MAT2B
GH05J163728 Enhancer 0.2 Ensembl 0.4 +18.9 18931 0.2 ENSG00000224012 LOC102724458 lnc-NUDCD2-8 piR-40348-048 MN298114-192 lnc-MAT2B-1-001 MAT2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724458 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102724458 Gene

Genomic Locations for LOC102724458 Gene
chr5:163,709,170-163,731,641
(GRCh38/hg38)
Size:
22,472 bases
Orientation:
Plus strand

Genomic View for LOC102724458 Gene

Genes around LOC102724458 on UCSC Golden Path with GeneCards custom track
LOC102724458 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC102724458 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724458 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724458 Gene

Proteins for LOC102724458 Gene

Post-translational modifications for LOC102724458 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724458 Gene

Domains & Families for LOC102724458 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724458 Gene

Function for LOC102724458 Gene

Phenotypes From GWAS Catalog for LOC102724458 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724458 Gene

Localization for LOC102724458 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724458 Gene

Pathways & Interactions for LOC102724458 Gene

PathCards logo

SuperPathways for LOC102724458 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724458 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724458 Gene

Drugs & Compounds for LOC102724458 Gene

No Compound Related Data Available

Transcripts for LOC102724458 Gene

LOC102724458 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724458 Gene

No ASD Table

Relevant External Links for LOC102724458 Gene

GeneLoc Exon Structure for
LOC102724458

No data available for mRNA/cDNA for LOC102724458 Gene

Expression for LOC102724458 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724458 Gene

Orthologs for LOC102724458 Gene

No data available for Orthologs and Evolution for LOC102724458 Gene

Paralogs for LOC102724458 Gene

No data available for Paralogs for LOC102724458 Gene

Variants for LOC102724458 Gene

Additional dbSNP identifiers (rs#s) for LOC102724458 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724458 Gene

Disorders for LOC102724458 Gene

No disorders were found for LOC102724458 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724458 Gene

Publications for LOC102724458 Gene

No publications were found for LOC102724458 Gene.

No data available for Mastermind for LOC102724458 Gene

Products for LOC102724458 Gene

Sources for LOC102724458 Gene