Aliases for LOC102724416 Gene

Subcategory (RNA class) for LOC102724416 Gene

ncRNA

Aliases for LOC102724416 Gene

  • Uncharacterized LOC102724416 3

External Ids for LOC102724416 Gene

Previous GeneCards Identifiers for LOC102724416 Gene

  • GC01U904107
  • GC01M065278

Summaries for LOC102724416 Gene

GeneCards Summary for LOC102724416 Gene

LOC102724416 (Uncharacterized LOC102724416) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724416 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724416 Gene

Genomics for LOC102724416 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724416 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J065308 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.2 -198 2 ARHGAP35 GATAD2A PRDM10 ZNF629 REST TFE3 ZNF512 NFKBIZ KDM1A ZNF692 DNAJC6 ENSG00000229294 LOC102724416 LINC01359 PDE4B LOC112268227 LEPROT
GH01J065289 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.6 17602 6 ZNF512 RFX1 LEF1 IKZF1 JUND DDX20 PRDM1 MTA2 PKNOX1 ZNF24 DNAJC6 COX6CP13 lnc-JAK1-8 ENSG00000229294 LOC102724416 LEPROT
GH01J065297 Enhancer 0.7 ENCODE dbSUPER 0.4 +11.5 11540 0.1 CTBP1 ESRRA ZNF217 GATAD2B CUX1 GATA3 DPF2 SMARCE1 COX6CP13 lnc-JAK1-8 LOC102724416 ENSG00000229294 DNAJC6 LEPROT
GH01J065298 Enhancer 0.3 dbSUPER 0.4 +9.6 9634 2.2 KDM1A COX6CP13 lnc-JAK1-8 LOC102724416 ENSG00000229294 DNAJC6 LEPROT
GH01J065304 Enhancer 0.2 dbSUPER 0.7 +4.5 4484 1.8 ENSG00000229294 LOC102724416 COX6CP13 lnc-JAK1-8 DNAJC6 LEPROT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724416 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102724416 Gene

Genomic Locations for LOC102724416 Gene
chr1:65,290,001-65,309,403
(GRCh38/hg38)
Size:
19,403 bases
Orientation:
Minus strand

Genomic View for LOC102724416 Gene

Genes around LOC102724416 on UCSC Golden Path with GeneCards custom track
LOC102724416 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC102724416 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724416 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724416 Gene

Proteins for LOC102724416 Gene

Post-translational modifications for LOC102724416 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724416 Gene

Domains & Families for LOC102724416 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724416 Gene

Function for LOC102724416 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724416 Gene

Localization for LOC102724416 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724416 Gene

Pathways & Interactions for LOC102724416 Gene

PathCards logo

SuperPathways for LOC102724416 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724416 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724416 Gene

Drugs & Compounds for LOC102724416 Gene

No Compound Related Data Available

Transcripts for LOC102724416 Gene

LOC102724416 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724416 Gene

No ASD Table

Relevant External Links for LOC102724416 Gene

GeneLoc Exon Structure for
LOC102724416

No data available for mRNA/cDNA for LOC102724416 Gene

Expression for LOC102724416 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC102724416 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC102724416

genes like me logo Genes that share expression patterns with LOC102724416: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724416 Gene

Orthologs for LOC102724416 Gene

No data available for Orthologs and Evolution for LOC102724416 Gene

Paralogs for LOC102724416 Gene

No data available for Paralogs for LOC102724416 Gene

Variants for LOC102724416 Gene

Additional dbSNP identifiers (rs#s) for LOC102724416 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724416 Gene

Disorders for LOC102724416 Gene

No disorders were found for LOC102724416 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724416 Gene

Publications for LOC102724416 Gene

No publications were found for LOC102724416 Gene.

No data available for Mastermind for LOC102724416 Gene

Products for LOC102724416 Gene

Sources for LOC102724416 Gene