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Aliases for LOC102724393 Gene

Subcategory (RNA class) for LOC102724393 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724393 Gene

  • Uncharacterized LOC102724393 3

External Ids for LOC102724393 Gene

Previous GeneCards Identifiers for LOC102724393 Gene

  • GC15U901695

Summaries for LOC102724393 Gene

GeneCards Summary for LOC102724393 Gene

LOC102724393 (Uncharacterized LOC102724393) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724393 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724393 Gene

Genomics for LOC102724393 Gene

GeneHancer (GH) Regulatory Elements for LOC102724393 Gene

Promoters and enhancers for LOC102724393 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J085350 Enhancer 0.8 ENCODE 600.7 -0.1 -59 0.2 ELF3 CEBPG ZNF384 TFE3 SP1 ZNF644 RXRA CEBPA GATAD2A RXRB LOC102724393 RNU7-79P ADAMTS7P4
GH15J085349 Enhancer 0.5 dbSUPER 600.7 +1.6 1633 2.7 SCRT2 ZBTB20 ATF2 ZNF398 LOC102724393 ENSG00000229212 ENSG00000259630 RNU7-79P AKAP13
GH15J085342 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.7 -3.3 -3341 6 ZNF121 CEBPG ZNF384 ZSCAN21 TFE3 SP7 SP1 PRDM1 GLIS2 PKNOX1 ADAMTS7P4 ENSG00000229212 RNU7-79P ENSG00000259276 AKAP13 LOC102724393
GH15J085327 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.4 -18397 6.5 SP1 ELF3 CTCF NKRF AHR MAFK ELF1 RELA CREM MLLT1 ADAMTS7P4 ENSG00000229212 ENSG00000259630 RNU7-79P LOC102724393
GH15J085357 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +8.8 8833 1.6 NFIB ZSCAN21 MAFK SP7 RELA SP1 CREM ZBED1 IKZF1 FOSL2 ENSG00000229212 SCAND2P LOC102724393 AKAP13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724393 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724393 Gene

Genomic Locations for LOC102724393 Gene
chr15:85,349,344-85,373,931
(GRCh38/hg38)
Size:
24,588 bases
Orientation:
Plus strand

Genomic View for LOC102724393 Gene

Genes around LOC102724393 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724393 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724393 Gene

Proteins for LOC102724393 Gene

Post-translational modifications for LOC102724393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724393 Gene

Domains & Families for LOC102724393 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724393 Gene

Function for LOC102724393 Gene

Phenotypes From GWAS Catalog for LOC102724393 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724393 Gene

Localization for LOC102724393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724393 Gene

Pathways & Interactions for LOC102724393 Gene

PathCards logo

SuperPathways for LOC102724393 Gene

No Data Available

Interacting Proteins for LOC102724393 Gene

Gene Ontology (GO) - Biological Process for LOC102724393 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724393 Gene

Drugs & Compounds for LOC102724393 Gene

No Compound Related Data Available

Transcripts for LOC102724393 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724393 Gene

No ASD Table

Relevant External Links for LOC102724393 Gene

GeneLoc Exon Structure for
LOC102724393

No data available for mRNA/cDNA for LOC102724393 Gene

Expression for LOC102724393 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724393 Gene

Orthologs for LOC102724393 Gene

No data available for Orthologs and Evolution for LOC102724393 Gene

Paralogs for LOC102724393 Gene

No data available for Paralogs for LOC102724393 Gene

Variants for LOC102724393 Gene

Sequence variations from dbSNP and Humsavar for LOC102724393 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000084884 -- 85,361,230(+) A/C/G intron_variant
rs1000195578 -- 85,368,212(+) G/A intron_variant
rs1000222460 -- 85,373,814(+) C/A non_coding_transcript_variant
rs1000240102 -- 85,349,954(+) G/C/T intron_variant
rs1000253612 -- 85,373,503(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724393 Gene

Disorders for LOC102724393 Gene

No disorders were found for LOC102724393 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724393 Gene

Publications for LOC102724393 Gene

No publications were found for LOC102724393 Gene.

No data available for External Links for LOC102724393 Gene

Products for LOC102724393 Gene

Sources for LOC102724393 Gene

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