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Aliases for LOC102724389 Gene

Subcategory (RNA class) for LOC102724389 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724389 Gene

  • Uncharacterized LOC102724389 3

External Ids for LOC102724389 Gene

Previous GeneCards Identifiers for LOC102724389 Gene

  • GC02U902880

Summaries for LOC102724389 Gene

GeneCards Summary for LOC102724389 Gene

LOC102724389 (Uncharacterized LOC102724389) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724389 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724389 Gene

Genomics for LOC102724389 Gene

GeneHancer (GH) Regulatory Elements for LOC102724389 Gene

Promoters and enhancers for LOC102724389 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J068245 Enhancer 0.5 FANTOM5 dbSUPER 600.7 -1.3 -1284 0.3 LOC102724389 PNO1 WDR92 PPP3R1 ENSG00000273398 ENSG00000273275 GC02P067636
GH02J068248 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.7 +4.4 4406 6 HDGF ZFX CTCF ELF3 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 PPP3R1 ENSG00000273064 PLEK WDR92 ETAA1 PNO1 LOC102724389 ENSG00000273398 GC02P067636
GH02J068188 Promoter/Enhancer 2.1 VISTA EPDnew Ensembl ENCODE dbSUPER 0.2 -52.0 -52017 14.4 CBFA2T2 MLLT1 CTCF SP7 EGR1 RAD21 SMARCA4 ZBTB33 DPF2 IKZF1 PPP3R1 WDR92 PNO1 C1D ENSG00000273275 LOC102724389 ENSG00000273398 GC02P067636
GH02J068317 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 0.2 +72.0 71983 3.2 ZFX ZNF148 YY1 SP7 MZF1 GLIS2 POLR2A ZNF600 PRDM10 REST CNRIP1 PPP3R1 ENSG00000273398 LOC102724389 GC02P067636
GH02J068244 Enhancer 0.5 dbSUPER 0.7 -2.6 -2566 1.2 CTCF PRDM1 ZNF316 RAD21 ZNF654 EMSY WDR92 PNO1 PPP3R1 LOC102724389 ENSG00000273398 ENSG00000273275 GC02P067636
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724389 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724389 Gene

Genomic Locations for LOC102724389 Gene
chr2:68,247,218-68,346,020
(GRCh38/hg38)
Size:
98,803 bases
Orientation:
Plus strand

Genomic View for LOC102724389 Gene

Genes around LOC102724389 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724389 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724389 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724389 Gene

Proteins for LOC102724389 Gene

Post-translational modifications for LOC102724389 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724389 Gene

Domains & Families for LOC102724389 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724389 Gene

Function for LOC102724389 Gene

Phenotypes From GWAS Catalog for LOC102724389 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724389 Gene

Localization for LOC102724389 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724389 Gene

Pathways & Interactions for LOC102724389 Gene

PathCards logo

SuperPathways for LOC102724389 Gene

No Data Available

Interacting Proteins for LOC102724389 Gene

Gene Ontology (GO) - Biological Process for LOC102724389 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724389 Gene

Drugs & Compounds for LOC102724389 Gene

No Compound Related Data Available

Transcripts for LOC102724389 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724389 Gene

No ASD Table

Relevant External Links for LOC102724389 Gene

GeneLoc Exon Structure for
LOC102724389

No data available for mRNA/cDNA for LOC102724389 Gene

Expression for LOC102724389 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724389 Gene

Orthologs for LOC102724389 Gene

No data available for Orthologs and Evolution for LOC102724389 Gene

Paralogs for LOC102724389 Gene

No data available for Paralogs for LOC102724389 Gene

Variants for LOC102724389 Gene

Sequence variations from dbSNP and Humsavar for LOC102724389 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000077778 -- 68,334,070(+) G/A intron_variant
rs1000094991 -- 68,335,540(+) G/C/T intron_variant
rs1000112277 -- 68,335,292(+) T/C intron_variant
rs1000325146 -- 68,339,625(+) T/A intron_variant
rs1000462142 -- 68,345,618(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724389 Gene

Disorders for LOC102724389 Gene

No disorders were found for LOC102724389 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724389 Gene

Publications for LOC102724389 Gene

No publications were found for LOC102724389 Gene.

No data available for External Links for LOC102724389 Gene

Products for LOC102724389 Gene

Sources for LOC102724389 Gene

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