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Aliases for LOC102724378 Gene

Subcategory (RNA class) for LOC102724378 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724378 Gene

  • Uncharacterized LOC102724378 3
  • Uncharacterized Protein LOC102724378 3

External Ids for LOC102724378 Gene

Previous GeneCards Identifiers for LOC102724378 Gene

  • GC22U900982
  • GC22M037739
  • GC22M038497
  • GC22M042758
  • GC22M038809
  • GC22M039929
  • GC22M040617
  • GC22M041059
  • GC22M041460
  • GC22M041871
  • GC22M042301
  • GC22M042653

Summaries for LOC102724378 Gene

GeneCards Summary for LOC102724378 Gene

LOC102724378 (Uncharacterized LOC102724378) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724378 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724378 Gene

Genomics for LOC102724378 Gene

GeneHancer (GH) Regulatory Elements for LOC102724378 Gene

Promoters and enhancers for LOC102724378 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J037745 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.2 -3153 11.2 ZFX SP1 ELF3 NKRF MLLT1 ZNF384 ZBTB7A YY1 SP7 PPARG TRIOBP H1F0 GCAT GGA1 LGALS2 PICK1 LGALS1 ANKRD54 POLR2F CDC42EP1
GH22J037738 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +5.8 5795 6.2 ZKSCAN8 POLR2A CEBPG ZSCAN21 SP7 SP1 PRDM1 RXRA IKZF1 ZBTB8A TRIOBP H1F0 GCAT GGA1 ANKRD54 LOC102724378
GH22J037761 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -14.8 -14824 2.5 CBFA2T2 BACH1 MAFK TRIM24 EGR1 SMARCA4 GMEB1 DPF2 IKZF1 PKNOX1 TRIOBP EIF3L GCAT H1F0 PIR51912 LOC102724378
GH22J037730 Enhancer 1.1 ENCODE dbSUPER 0.4 +15.1 15111 2.7 ZNF652 ZFX ELF3 CEBPG ZNF687 SP1 HNF1A PPARG ZNF384 ZNF644 TRIOBP H1F0 LOC102724378
GH22J037733 Enhancer 1 ENCODE dbSUPER 0.4 +12.9 12856 1.3 ELF3 CTCF SP1 PPARG SP5 KAT8 RXRA LEF1 GATAD2A REST TRIOBP H1F0 LOC102724378
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724378 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724378 Gene

Genomic Locations for LOC102724378 Gene
chr22:37,729,416-37,747,434
(GRCh38/hg38)
Size:
18,019 bases
Orientation:
Minus strand

Genomic View for LOC102724378 Gene

Genes around LOC102724378 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724378 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724378 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724378 Gene

Proteins for LOC102724378 Gene

Post-translational modifications for LOC102724378 Gene

No Post-translational modifications

Other Protein References for LOC102724378 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC102724378 Gene

Domains & Families for LOC102724378 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724378 Gene

Function for LOC102724378 Gene

Phenotypes From GWAS Catalog for LOC102724378 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724378 Gene

Localization for LOC102724378 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724378 Gene

Pathways & Interactions for LOC102724378 Gene

PathCards logo

SuperPathways for LOC102724378 Gene

No Data Available

Interacting Proteins for LOC102724378 Gene

Gene Ontology (GO) - Biological Process for LOC102724378 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724378 Gene

Drugs & Compounds for LOC102724378 Gene

No Compound Related Data Available

Transcripts for LOC102724378 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724378 Gene

No ASD Table

Relevant External Links for LOC102724378 Gene

GeneLoc Exon Structure for
LOC102724378

No data available for mRNA/cDNA for LOC102724378 Gene

Expression for LOC102724378 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724378 Gene

Orthologs for LOC102724378 Gene

No data available for Orthologs and Evolution for LOC102724378 Gene

Paralogs for LOC102724378 Gene

No data available for Paralogs for LOC102724378 Gene

Variants for LOC102724378 Gene

Sequence variations from dbSNP and Humsavar for LOC102724378 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs200493962 likely-benign, uncertain-significance, not specified, Inborn genetic diseases 37,740,934(-) C/T genic_downstream_transcript_variant, intron_variant
rs1172498750 likely-benign, not specified 37,740,957(-) A/G genic_downstream_transcript_variant, intron_variant
rs183189469 likely-benign, not specified 37,738,701(-) C/G downstream_transcript_variant
rs762586713 likely-benign, not specified 37,746,296(-) G/A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs370224413 uncertain-significance, not specified 37,738,702(-) C/A downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724378 Gene

Disorders for LOC102724378 Gene

No disorders were found for LOC102724378 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724378 Gene

Publications for LOC102724378 Gene

No publications were found for LOC102724378 Gene.

No data available for External Links for LOC102724378 Gene

Products for LOC102724378 Gene

Sources for LOC102724378 Gene

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