Aliases for LOC102724330 Gene

Subcategory (RNA class) for LOC102724330 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC102724330 Gene

  • Uncharacterized LOC102724330 3
  • Novel Transcript 5
  • Lnc-NPBWR1-12 168
  • NONHSAG050209 92
  • HSALNG0065245 167
  • NONHSAG050210 92
  • AC064807.1 5

External Ids for LOC102724330 Gene

Previous GeneCards Identifiers for LOC102724330 Gene

  • GC08U901887

Summaries for LOC102724330 Gene

GeneCards Summary for LOC102724330 Gene

LOC102724330 (Uncharacterized LOC102724330) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC102724330 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724330 Gene

Genomics for LOC102724330 Gene

GeneHancer (GH) Regulatory Elements for LOC102724330 Gene

Promoters and enhancers for LOC102724330 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J051896 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 507.8 +0.3 336 6.4 FOXK2 ZNF217 SIN3A TCF12 NRF1 MYC POLR2G GTF2E2 PHF8 ZFX PCMTD1 LOC102724330 PXDNL ENSG00000253844 piR-41245-273
GH08J051858 Enhancer 0.9 Ensembl ENCODE dbSUPER 20 -40.0 -39963 2.2 FOXA2 FOS POLR2A ZBTB33 RXRA MAX HNF4A BHLHE40 GATA1 HNF4G lnc-PXDNL-3 PCMTD1 LOC102724330 ENSG00000253475 piR-50437-629
GH08J051960 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 6.5 +63.1 63083 3 ZBTB40 SP1 MEF2C TRIM22 NFYB BCL11A TCF12 ZNF316 CBFB MAFF ENSG00000253844 PCMTD1 LOC102724330 ENSG00000254136
GH08J051809 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 7.3 -89.7 -89744 0.6 POLR2G RAD21 JUND AGO2 TBP CTCF ENSG00000272076 PXDNL LOC102724330 piR-57267
GH08J051850 Enhancer 1.1 Ensembl ENCODE dbSUPER 7.3 -48.3 -48263 3.2 ZNF217 CTCF REST CUX1 RAD21 TBX3 GATAD2B CTBP1 HES1 FOXA2 PCMTD1 LOC102724330 PXDNL piR-50437-629 lnc-PXDNL-3 piR-52916-033
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724330 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724330 Gene

Genomic Locations for LOC102724330 Gene
chr8:51,899,264-52,022,948
(GRCh38/hg38)
Size:
123,685 bases
Orientation:
Plus strand

Genomic View for LOC102724330 Gene

Genes around LOC102724330 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724330 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724330 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724330 Gene

Proteins for LOC102724330 Gene

Post-translational modifications for LOC102724330 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724330 Gene

Domains & Families for LOC102724330 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724330 Gene

Function for LOC102724330 Gene

Phenotypes From GWAS Catalog for LOC102724330 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724330 Gene

Localization for LOC102724330 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724330 Gene

Pathways & Interactions for LOC102724330 Gene

PathCards logo

SuperPathways for LOC102724330 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC102724330 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724330 Gene

Drugs & Compounds for LOC102724330 Gene

No Compound Related Data Available

Transcripts for LOC102724330 Gene

mRNA/cDNA for LOC102724330 Gene

17 RNACentral transcripts :
1 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
4 LncBook transcripts :
15 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724330 Gene

No ASD Table

Relevant External Links for LOC102724330 Gene

GeneLoc Exon Structure for
LOC102724330

Expression for LOC102724330 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC102724330 Gene

genes like me logo Genes that share expression patterns with LOC102724330: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724330 Gene

Orthologs for LOC102724330 Gene

Evolution for LOC102724330 Gene

ENSEMBL:
Gene Tree for LOC102724330 (if available)
TreeFam:
Gene Tree for LOC102724330 (if available)

No data available for Orthologs for LOC102724330 Gene

Paralogs for LOC102724330 Gene

No data available for Paralogs for LOC102724330 Gene

Variants for LOC102724330 Gene

Additional dbSNP identifiers (rs#s) for LOC102724330 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724330 Gene

Disorders for LOC102724330 Gene

No disorders were found for LOC102724330 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724330 Gene

Publications for LOC102724330 Gene

No publications were found for LOC102724330 Gene.

No data available for Mastermind for LOC102724330 Gene

Products for LOC102724330 Gene

Sources for LOC102724330 Gene