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Aliases for LOC102724319 Gene
Data sources for LOC102724319 Gene:
Subcategory (RNA class) for LOC102724319 Gene
lncRNA
Aliases for LOC102724319 Gene
External Ids for LOC102724319 Gene
- NCBI Entrez Gene: 102724319
- Ensembl: ENSG00000286429
Previous GeneCards Identifiers for LOC102724319 Gene
- GC01U904208
Summaries for LOC102724319 Gene
GeneCards Summary for LOC102724319 Gene
LOC102724319 (Uncharacterized LOC102724319) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC102724319 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724319 Gene
Genomics for LOC102724319 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC102724319 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J063487 | Enhancer | 0.3 | ENCODE | 250.7 | -0.1 | -72 | 0.2 | POLR2A | LOC102724319 EFCAB7 ITGB3BP ENSG00000236674 ALG6 piR-54592-018 lnc-ITGB3BP-5 | |
| GH01J063476 | Enhancer | 0.2 | Ensembl | 0.4 | -11.5 | -11456 | 0.6 | ALG6 ENSG00000236674 EFCAB7 piR-54592-018 LOC102724319 lnc-ITGB3BP-5 ITGB3BP |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC102724319 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC102724319 Gene
Latest Assembly
- chr1:63,487,957-63,518,403
- (GRCh38/hg38)
- Size:
- 30,447 bases
- Orientation:
- Plus strand
Genomic View for LOC102724319 Gene
Genes around LOC102724319 on UCSC Golden Path with GeneCards custom track
LOC102724319 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 1p31.3 by Entrez Gene
- 1p31.3 by Ensembl
LOC102724319 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC102724319 Gene
Proteins for LOC102724319 Gene
Post-translational modifications for LOC102724319 Gene
No Post-translational modifications
No data available for DME Specific Peptides for LOC102724319 Gene
Domains & Families for LOC102724319 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724319 Gene
Function for LOC102724319 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724319 Gene
Localization for LOC102724319 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724319 Gene
Transcripts for LOC102724319 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC102724319 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000EF5787_9606 | lncRNA | 1206 | 1 |
Ensembl: ENST00000657197 (view in UCSC) , |
| URS00009AE98A_9606 | lncRNA | 1113 | 2 |
LncBook: HSALNT0008187, NONCODE: NONHSAT149086.1, |
| URS00008B8850_9606 | lncRNA | 842 | 2 |
LNCipedia: lnc-EFCAB7-3:1, NONCODE: NONHSAT003685.2, |
| URS0001BF1D7C_9606 | lncRNA | 1246 | 1 |
LncBook: HSALNT0008186, |
| URS0001BDFB4C_9606 | lncRNA | 1113 | 1 |
LncBook: HSALNT0008187, |
LOC102724319 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for LOC102724319 Gene
- GeneLoc Exon Structure for
- LOC102724319
No data available for mRNA/cDNA for LOC102724319 Gene
Expression for LOC102724319 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724319 Gene
Orthologs for LOC102724319 Gene
No data available for Orthologs for LOC102724319 Gene
Paralogs for LOC102724319 Gene
No data available for Paralogs for LOC102724319 Gene
Variants for LOC102724319 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724319 Gene
Disorders for LOC102724319 Gene
No disorders were found for LOC102724319 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724319 Gene
Publications for LOC102724319 Gene
No publications were found for LOC102724319 Gene.
No data available for Mastermind for LOC102724319 Gene
Products for LOC102724319 Gene
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- Browse OriGene Inhibitory RNA Products For LOC102724319
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC102724319
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- Browse OriGene miRNA Products For LOC102724319
- Browse Sino Biological cDNA Clones
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC102724319
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC102724319
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC102724319
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC102724319
Sources for LOC102724319 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB