Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC102724288 Gene

Subcategory (RNA class) for LOC102724288 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724288 Gene

  • Uncharacterized LOC102724288 3

External Ids for LOC102724288 Gene

Previous GeneCards Identifiers for LOC102724288 Gene

  • GC02U902933

Summaries for LOC102724288 Gene

GeneCards Summary for LOC102724288 Gene

LOC102724288 (Uncharacterized LOC102724288) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724288 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724288 Gene

Genomics for LOC102724288 Gene

GeneHancer (GH) Regulatory Elements for LOC102724288 Gene

Promoters and enhancers for LOC102724288 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J182066 Enhancer 1 Ensembl ENCODE 0.4 -11.7 -11738 3.5 MAFK SP7 SP1 CEBPG POLR2A RXRA GATAD2B ZSCAN4 CTBP1 ZNF316 PPP1R1C LOC102724288 GC02P182126
GH02J182077 Enhancer 1.1 Ensembl ENCODE 0.3 -21.3 -21312 1.4 CTCF ZSCAN21 SP7 RAD21 RXRA PRDM10 REST ZEB2 FOXA2 ZNF561 PPP1R1C RNU6ATAC19P LOC102724288 GC02P182126
GH02J182050 Enhancer 0.5 Ensembl 0.4 +5.7 5711 0.2 SP1 FOXA2 JUND RAD21 HNF4A RXRA FOXA1 RNA5SP113 LOC102724288 PPP1R1C
GH02J182079 Enhancer 0.7 ENCODE 0.3 -22.9 -22927 0 ZXDB OSR2 FOXA2 CUX1 KLF8 TCF7L2 ZNF189 OVOL3 WT1 FOXA1 PPP1R1C RNU6ATAC19P LOC102724288 GC02P182126
GH02J182058 Enhancer 0.3 Ensembl 0.7 -2.4 -2389 0.4 PKNOX1 LOC102724288 GC02P182126 PPP1R1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724288 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724288 Gene

Genomic Locations for LOC102724288 Gene
chr2:182,051,960-182,056,212
(GRCh38/hg38)
Size:
4,253 bases
Orientation:
Minus strand

Genomic View for LOC102724288 Gene

Genes around LOC102724288 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724288 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724288 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724288 Gene

Proteins for LOC102724288 Gene

Post-translational modifications for LOC102724288 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724288 Gene

Domains & Families for LOC102724288 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724288 Gene

Function for LOC102724288 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724288 Gene

Localization for LOC102724288 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724288 Gene

Pathways & Interactions for LOC102724288 Gene

PathCards logo

SuperPathways for LOC102724288 Gene

No Data Available

Interacting Proteins for LOC102724288 Gene

Gene Ontology (GO) - Biological Process for LOC102724288 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724288 Gene

Drugs & Compounds for LOC102724288 Gene

No Compound Related Data Available

Transcripts for LOC102724288 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724288 Gene

No ASD Table

Relevant External Links for LOC102724288 Gene

GeneLoc Exon Structure for
LOC102724288

No data available for mRNA/cDNA for LOC102724288 Gene

Expression for LOC102724288 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724288 Gene

Orthologs for LOC102724288 Gene

No data available for Orthologs and Evolution for LOC102724288 Gene

Paralogs for LOC102724288 Gene

No data available for Paralogs for LOC102724288 Gene

Variants for LOC102724288 Gene

Sequence variations from dbSNP and Humsavar for LOC102724288 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000817986 -- 182,057,817(-) C/G/T non_coding_transcript_variant
rs1000880078 -- 182,057,454(-) T/C non_coding_transcript_variant
rs1000973861 -- 182,051,322(-) G/T non_coding_transcript_variant
rs1001003609 -- 182,051,631(-) A/G non_coding_transcript_variant
rs1001248291 -- 182,057,182(-) G/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724288 Gene

Disorders for LOC102724288 Gene

No disorders were found for LOC102724288 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724288 Gene

Publications for LOC102724288 Gene

No publications were found for LOC102724288 Gene.

No data available for External Links for LOC102724288 Gene

Products for LOC102724288 Gene

Sources for LOC102724288 Gene

Content
Loading form....