Aliases for LOC102724273 Gene

Data sources for LOC102724273 Gene:

RNA type for LOC102724273 Gene

ncRNA

Aliases for LOC102724273 Gene

External Ids for LOC102724273 Gene

Previous GeneCards Identifiers for LOC102724273 Gene

  • GC19U901850

Summaries for LOC102724273 Gene

GeneCards Summary for LOC102724273 Gene

LOC102724273 (Uncharacterized LOC102724273) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724273 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724273 Gene

Genomics for LOC102724273 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724273 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J054151 Enhancer 0.7 Ensembl ENCODE 0.7 -2.5 -2450 5.1 POLR2A KLF9 RBM22 PRDM10 BHLHE40 SUPT5H REST GLIS2 RBFOX2 TMC4 ENSG00000237017 PRPF31 LILRB3 LILRA6 ENSG00000249189 LILRB5 HSALNG0127478 LOC102724273 LENG1
GH19J054157 Enhancer 0.6 ENCODE 0.4 -5.3 -5339 0.2 ZEB1 ZNF217 CTBP1 SIN3A SMARCE1 PKNOX1 CTCF MAZ DPF2 RFX1 HSALNG0127478 LENG1 LOC102724273 CNOT3
GH19J054147 Enhancer 0.3 ENCODE 0.7 +4.0 4019 1 RBFOX2 ZFHX2 TMC4 HSALNG0127477 LOC102724273 HSALNG0127476 CNOT3 LENG1
GH19J054149 Enhancer 0.2 ENCODE 0.7 +2.6 2578 0.2 HSALNG0127477 TMC4 LOC102724273 CNOT3 HSALNG0127476 LENG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724273 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102724273 Gene

Latest Assembly
chr19:54,146,671-54,151,799
(GRCh38/hg38)
Size:
5,129 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr19(ALT_REF_LOCI_1):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_2):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_3):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_4):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_5):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_6):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_7):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_8):121,520-126,649 (-)
  • chr19(ALT_REF_LOCI_9):121,520-126,649 (-)

Genomic View for LOC102724273 Gene

Genes around LOC102724273 on UCSC Golden Path with GeneCards custom track
LOC102724273 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC102724273 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724273 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724273 Gene

Proteins for LOC102724273 Gene

Post-translational modifications for LOC102724273 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724273 Gene

Domains & Families for LOC102724273 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724273 Gene

Function for LOC102724273 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724273 Gene

Localization for LOC102724273 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724273 Gene

Pathways & Interactions for LOC102724273 Gene

PathCards logo

SuperPathways for LOC102724273 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102724273 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102724273 Gene

Drugs & Compounds for LOC102724273 Gene

No Compound Related Data Available

Transcripts for LOC102724273 Gene

LOC102724273 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724273 Gene

No ASD Table

Relevant External Links for LOC102724273 Gene

GeneLoc Exon Structure for
LOC102724273

No data available for mRNA/cDNA for LOC102724273 Gene

Expression for LOC102724273 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724273 Gene

Orthologs for LOC102724273 Gene

No data available for Orthologs and Evolution for LOC102724273 Gene

Paralogs for LOC102724273 Gene

No data available for Paralogs for LOC102724273 Gene

Variants for LOC102724273 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC102724273 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724273 Gene

Disorders for LOC102724273 Gene

No disorders were found for LOC102724273 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724273 Gene

Publications for LOC102724273 Gene

No publications were found for LOC102724273 Gene.

No data available for Mastermind for LOC102724273 Gene

Products for LOC102724273 Gene

Sources for LOC102724273 Gene