Aliases for LOC102724265 Gene

Aliases for LOC102724265 Gene

  • Uncharacterized LOC102724265 3 5
  • Uncharacterized Protein LOC102724265 3
  • NONHSAG008889.2 89
  • Lnc-MYEOV-4 163
  • AP000439.2 5

External Ids for LOC102724265 Gene

Previous GeneCards Identifiers for LOC102724265 Gene

  • GC11U902227

Summaries for LOC102724265 Gene

GeneCards Summary for LOC102724265 Gene

LOC102724265 (Uncharacterized LOC102724265) is a Protein Coding gene.

Additional gene information for LOC102724265 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102724265 Gene

Genomics for LOC102724265 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102724265 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J069426 Enhancer 1.1 Ensembl CraniofacialAtlas 250.7 +1.5 1546 0.8 CEBPA ATF3 YY1 HOMEZ THAP11 FOXA2 KDM6A SMAD4 RXRA ZNF511 LOC102724265 RF00017-876 HSALNG0085342 ENSG00000255606 CCND1
GH11J069425 Enhancer 0.5 Ensembl 250.7 +0.5 545 0.8 MYC MAX NFYC EGR2 ZFHX2 LOC102724265 RF00017-876 ENSG00000255606 CCND1
GH11J069249 Enhancer 0.9 Ensembl ENCODE dbSUPER 5.7 -174.0 -174027 3.7 ETS1 SMAD4 USF2 ZNF217 MLLT1 ZNF280D HNRNPL ZBTB17 EP300 CEBPB CCND1 LOC102724265 LOC105369368 piR-48325-017 MYEOV lnc-MYEOV-3 SMIM38
GH11J069442 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +18.3 18284 3.6 SP1 ZNF207 MYC IKZF1 NCOR1 ZNF592 KLF9 POLR2A CEBPA YY1 ENSG00000255606 HSALNG0085344 CCND1 HSALNG0085342 LOC102724265
GH11J069419 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.2 -5193 2.9 ZNF592 MAX MAFF SMAD4 SAP130 RFX5 ETV4 MLLT1 GABPB1 ZNF316 ENSG00000259854 LOC102724265 ENSG00000255606 MYEOV
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724265 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for LOC102724265

Genomic Locations for LOC102724265 Gene

Latest Assembly
chr11:69,425,655-69,429,624
(GRCh38/hg38)
Size:
3,970 bases
Orientation:
Plus strand

Previous Assembly
chr11:69,240,423-69,244,392
(GRCh37/hg19 by Entrez Gene)
Size:
3,970 bases
Orientation:
Plus strand

chr11:69,240,458-69,244,389
(GRCh37/hg19 by Ensembl)
Size:
3,932 bases
Orientation:
Plus strand

Genomic View for LOC102724265 Gene

Genes around LOC102724265 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724265 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724265 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724265 Gene

Proteins for LOC102724265 Gene

Post-translational modifications for LOC102724265 Gene

No Post-translational modifications

Other Protein References for LOC102724265 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC102724265 Gene

Domains & Families for LOC102724265 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102724265 Gene

Function for LOC102724265 Gene

Phenotypes From GWAS Catalog for LOC102724265 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724265 Gene

Localization for LOC102724265 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for LOC102724265 gene
Compartment Confidence
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724265 Gene

Pathways & Interactions for LOC102724265 Gene

PathCards logo

SuperPathways for LOC102724265 Gene

No Data Available

Interacting Proteins for LOC102724265 Gene

Gene Ontology (GO) - Biological Process for LOC102724265 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724265 Gene

Drugs & Compounds for LOC102724265 Gene

No Compound Related Data Available

Transcripts for LOC102724265 Gene

mRNA/cDNA for LOC102724265 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 RNACentral transcripts :
2 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724265 Gene

No ASD Table

Relevant External Links for LOC102724265 Gene

GeneLoc Exon Structure for
LOC102724265

Expression for LOC102724265 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC102724265 Gene

genes like me logo Genes that share expression patterns with LOC102724265: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724265 Gene

Orthologs for LOC102724265 Gene

Evolution for LOC102724265 Gene

ENSEMBL:
Gene Tree for LOC102724265 (if available)
TreeFam:
Gene Tree for LOC102724265 (if available)

No data available for Orthologs for LOC102724265 Gene

Paralogs for LOC102724265 Gene

No data available for Paralogs for LOC102724265 Gene

Variants for LOC102724265 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC102724265 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724265 Gene

Disorders for LOC102724265 Gene

Additional Disease Information for LOC102724265

Open Targets Platform
Open Targets Platform

No disorders were found for LOC102724265 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC102724265 Gene

Publications for LOC102724265 Gene

  1. Genome-wide association study of renal cell carcinoma identifies two susceptibility loci on 2p21 and 11q13.3. (PMID: 21131975) Purdue MP … Brennan P (Nature genetics 2011) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC102724265 Gene

Products for LOC102724265 Gene

Sources for LOC102724265 Gene