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Aliases for LOC102724219 Gene

Aliases for LOC102724219 Gene

  • Uncharacterized LOC102724219 3 5
  • Uncharacterized Protein LOC102724219 3
  • CU633967.1 5

External Ids for LOC102724219 Gene

Previous GeneCards Identifiers for LOC102724219 Gene

  • GC21U900582

Summaries for LOC102724219 Gene

GeneCards Summary for LOC102724219 Gene

LOC102724219 (Uncharacterized LOC102724219) is a Protein Coding gene. An important paralog of this gene is LOC102724843.

Additional gene information for LOC102724219 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724219 Gene

Genomics for LOC102724219 Gene

GeneHancer (GH) Regulatory Elements for LOC102724219 Gene

Promoters and enhancers for LOC102724219 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J005553 Promoter 0.5 Ensembl 600.7 +1.2 1164 3.6 LOC102724219 ENSG00000277777
GH21J005565 Promoter 0.5 Ensembl 0.4 +11.9 11864 0.6 LOC102724219 ENSG00000277777
GH21J005548 Enhancer 0.2 Ensembl 0.4 -5.1 -5136 0.2 LOC105379489 LOC102724219
GH21J005568 Enhancer 0.2 Ensembl 0.4 +15.4 15364 1.6 LOC102724219 ENSG00000277777
GH21J005584 Enhancer 0.2 Ensembl 0.3 +31.1 31064 1 ENSG00000277777 LOC102724219
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724219 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724219 Gene

Genomic Locations for LOC102724219 Gene
chr21:5,553,637-5,614,880
(GRCh38/hg38)
Size:
61,244 bases
Orientation:
Plus strand

Genomic View for LOC102724219 Gene

Genes around LOC102724219 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724219 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724219 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724219 Gene

Proteins for LOC102724219 Gene

Post-translational modifications for LOC102724219 Gene

No Post-translational modifications

Other Protein References for LOC102724219 Gene

No data available for DME Specific Peptides for LOC102724219 Gene

Domains & Families for LOC102724219 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724219 Gene

Function for LOC102724219 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724219 Gene

Localization for LOC102724219 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724219 Gene

Pathways & Interactions for LOC102724219 Gene

PathCards logo

SuperPathways for LOC102724219 Gene

No Data Available

Interacting Proteins for LOC102724219 Gene

Gene Ontology (GO) - Biological Process for LOC102724219 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724219 Gene

Drugs & Compounds for LOC102724219 Gene

No Compound Related Data Available

Transcripts for LOC102724219 Gene

mRNA/cDNA for LOC102724219 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(13) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(13) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724219 Gene

No ASD Table

Relevant External Links for LOC102724219 Gene

GeneLoc Exon Structure for
LOC102724219

Expression for LOC102724219 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724219 Gene

Orthologs for LOC102724219 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC102724219 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC101058456 34
  • 90.31 (n)
Species where no ortholog for LOC102724219 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LOC102724219 Gene

ENSEMBL:
Gene Tree for LOC102724219 (if available)
TreeFam:
Gene Tree for LOC102724219 (if available)

Paralogs for LOC102724219 Gene

Paralogs for LOC102724219 Gene

genes like me logo Genes that share paralogs with LOC102724219: view

Variants for LOC102724219 Gene

Sequence variations from dbSNP and Humsavar for LOC102724219 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1161111304 -- 5,582,815(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1164605294 -- 5,583,298(+) C/A 5_prime_UTR_variant, intron_variant
rs1179764821 -- 5,582,903(+) A/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1190121882 -- 5,582,877(+) AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA/AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1199400207 -- 5,552,726(+) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724219 Gene

Disorders for LOC102724219 Gene

No disorders were found for LOC102724219 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724219 Gene

Publications for LOC102724219 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

No data available for External Links for LOC102724219 Gene

Products for LOC102724219 Gene

Sources for LOC102724219 Gene

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