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Aliases for LOC102724046 Gene

Subcategory (RNA class) for LOC102724046 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724046 Gene

  • Uncharacterized LOC102724046 3

External Ids for LOC102724046 Gene

Previous GeneCards Identifiers for LOC102724046 Gene

  • GC01U904180

Summaries for LOC102724046 Gene

GeneCards Summary for LOC102724046 Gene

LOC102724046 (Uncharacterized LOC102724046) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724046 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724046 Gene

Genomics for LOC102724046 Gene

GeneHancer (GH) Regulatory Elements for LOC102724046 Gene

Promoters and enhancers for LOC102724046 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J223102 Enhancer 1 Ensembl ENCODE 600.7 +0.1 66 0.9 ZSCAN21 SP7 MZF1 ZBTB8A ZNF600 PRDM10 ZIC2 ZEB2 ZNF639 ZNF629 LOC102724046 TLR5 ENSG00000236846 ENSG00000228106 DISP1 NDUFB1P2
GH01J223109 Enhancer 1 Ensembl ENCODE 0.4 -7.0 -7027 2.5 ELF3 CEBPG TFE3 SP1 PRDM1 ZNF644 RXRA SOX13 CEBPA GATAD2A TAF1A TLR5 LOC102724046 PIR45603
GH01J223085 Enhancer 1 Ensembl ENCODE 0.4 +15.1 15137 4.5 CTCF MCM2 PRDM1 RAD21 ZNF704 ZNF143 ZSCAN4 KLF7 ZNF747 ZBTB48 CICP5 CICP13 ENSG00000272750 SUSD4 TLR5 LOC102724046 NDUFB1P2
GH01J223081 Enhancer 1 ENCODE 0.3 +21.8 21768 1.1 HDGF CC2D1A ELF3 CTCF RERE GTF2F1 NFIB ZSCAN21 AHR SP7 ENSG00000228106 DISP1 LOC102724046 NDUFB1P2
GH01J223116 Promoter/Enhancer 0.7 EPDnew Ensembl 0.4 -13.2 -13217 0.2 PIR45603 TLR5 LOC102724046
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724046 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724046 Gene

Genomic Locations for LOC102724046 Gene
chr1:223,092,928-223,103,308
(GRCh38/hg38)
Size:
10,381 bases
Orientation:
Minus strand

Genomic View for LOC102724046 Gene

Genes around LOC102724046 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724046 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724046 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724046 Gene

Proteins for LOC102724046 Gene

Post-translational modifications for LOC102724046 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724046 Gene

Domains & Families for LOC102724046 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724046 Gene

Function for LOC102724046 Gene

Phenotypes From GWAS Catalog for LOC102724046 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724046 Gene

Localization for LOC102724046 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724046 Gene

Pathways & Interactions for LOC102724046 Gene

PathCards logo

SuperPathways for LOC102724046 Gene

No Data Available

Interacting Proteins for LOC102724046 Gene

Gene Ontology (GO) - Biological Process for LOC102724046 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724046 Gene

Drugs & Compounds for LOC102724046 Gene

No Compound Related Data Available

Transcripts for LOC102724046 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724046 Gene

No ASD Table

Relevant External Links for LOC102724046 Gene

GeneLoc Exon Structure for
LOC102724046

No data available for mRNA/cDNA for LOC102724046 Gene

Expression for LOC102724046 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724046 Gene

Orthologs for LOC102724046 Gene

No data available for Orthologs and Evolution for LOC102724046 Gene

Paralogs for LOC102724046 Gene

No data available for Paralogs for LOC102724046 Gene

Variants for LOC102724046 Gene

Sequence variations from dbSNP and Humsavar for LOC102724046 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000118887 -- 223,097,429(-) C/A/T upstream_transcript_variant
rs1000187720 -- 223,095,975(-) G/A upstream_transcript_variant
rs1000229766 -- 223,093,834(-) G/A intron_variant
rs1000239525 -- 223,094,087(-) C/T splice_donor_variant
rs1000634547 -- 223,097,615(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724046 Gene

Disorders for LOC102724046 Gene

No disorders were found for LOC102724046 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724046 Gene

Publications for LOC102724046 Gene

No publications were found for LOC102724046 Gene.

No data available for External Links for LOC102724046 Gene

Products for LOC102724046 Gene

Sources for LOC102724046 Gene

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