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Aliases for LOC102724034 Gene

Subcategory (RNA class) for LOC102724034 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724034 Gene

  • Uncharacterized LOC102724034 3

External Ids for LOC102724034 Gene

Previous GeneCards Identifiers for LOC102724034 Gene

  • GC15U901762

Summaries for LOC102724034 Gene

GeneCards Summary for LOC102724034 Gene

LOC102724034 (Uncharacterized LOC102724034) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724034 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724034 Gene

Genomics for LOC102724034 Gene

GeneHancer (GH) Regulatory Elements for LOC102724034 Gene

Promoters and enhancers for LOC102724034 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J082445 Promoter 0.7 Ensembl 600.7 -1.2 -1232 3.4 ZSCAN4 ZNF692 ZFP69B UBE2Q2P6 LOC102724034 CSPG4P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724034 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724034 Gene

Genomic Locations for LOC102724034 Gene
chr15:82,443,332-82,444,869
(GRCh38/hg38)
Size:
1,538 bases
Orientation:
Minus strand

Genomic View for LOC102724034 Gene

Genes around LOC102724034 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724034 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724034 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724034 Gene

Proteins for LOC102724034 Gene

Post-translational modifications for LOC102724034 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724034 Gene

Domains & Families for LOC102724034 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724034 Gene

Function for LOC102724034 Gene

Phenotypes From GWAS Catalog for LOC102724034 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724034 Gene

Localization for LOC102724034 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724034 Gene

Pathways & Interactions for LOC102724034 Gene

PathCards logo

SuperPathways for LOC102724034 Gene

No Data Available

Interacting Proteins for LOC102724034 Gene

Gene Ontology (GO) - Biological Process for LOC102724034 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724034 Gene

Drugs & Compounds for LOC102724034 Gene

No Compound Related Data Available

Transcripts for LOC102724034 Gene

mRNA/cDNA for LOC102724034 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724034 Gene

No ASD Table

Relevant External Links for LOC102724034 Gene

GeneLoc Exon Structure for
LOC102724034

Expression for LOC102724034 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724034 Gene

Orthologs for LOC102724034 Gene

No data available for Orthologs and Evolution for LOC102724034 Gene

Paralogs for LOC102724034 Gene

No data available for Paralogs for LOC102724034 Gene

Variants for LOC102724034 Gene

Sequence variations from dbSNP and Humsavar for LOC102724034 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1030890407 -- 82,445,315(-) G/A upstream_transcript_variant
rs11486360 -- 82,444,003(-) T/A/G intron_variant
rs11486361 -- 82,444,017(-) A/G intron_variant
rs1156422979 -- 82,443,689(-) T/C non_coding_transcript_variant
rs1157512127 -- 82,443,059(-) T/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724034 Gene

Variant ID Type Subtype PubMed ID
dgv1254n106 CNV deletion 24896259
dgv2638n100 CNV gain 25217958
dgv2641n100 CNV loss 25217958
dgv2642n100 CNV gain+loss 25217958
esv21531 CNV gain+loss 19812545
esv22023 CNV gain 19812545
esv22027 CNV gain+loss 19812545
esv2666932 CNV deletion 23128226
esv2668556 CNV deletion 23128226
esv2672879 CNV deletion 23128226
esv2760048 CNV gain+loss 17122850
esv2761880 CNV gain 21179565
esv3569809 CNV gain 25503493
esv999520 CNV gain 20482838
nsv1035899 CNV gain 25217958
nsv1069872 CNV deletion 25765185
nsv1070718 CNV deletion 25765185
nsv1120052 OTHER inversion 24896259
nsv1136198 CNV deletion 24896259
nsv428310 CNV gain+loss 18775914
nsv469699 CNV loss 16826518
nsv471686 CNV gain+loss 15918152
nsv518289 CNV loss 19592680
nsv9286 CNV gain+loss 18304495
nsv9290 CNV gain+loss 18304495
nsv974657 CNV duplication 23825009
nsv976960 CNV duplication 23825009
nsv977001 CNV duplication 23825009
nsv977744 CNV duplication 23825009
nsv984102 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724034 Gene

Disorders for LOC102724034 Gene

No disorders were found for LOC102724034 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724034 Gene

Publications for LOC102724034 Gene

No publications were found for LOC102724034 Gene.

No data available for External Links for LOC102724034 Gene

Products for LOC102724034 Gene

Sources for LOC102724034 Gene

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