Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC102724009 Gene

Subcategory (RNA class) for LOC102724009 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724009 Gene

  • Uncharacterized LOC102724009 3
  • Novel Transcript, Antisense To KIF1C 5
  • AC004771.1 5

External Ids for LOC102724009 Gene

Previous GeneCards Identifiers for LOC102724009 Gene

  • GC17U902042

Summaries for LOC102724009 Gene

GeneCards Summary for LOC102724009 Gene

LOC102724009 (Uncharacterized LOC102724009) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724009 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724009 Gene

Genomics for LOC102724009 Gene

GeneHancer (GH) Regulatory Elements for LOC102724009 Gene

Promoters and enhancers for LOC102724009 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724009 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724009 Gene

Genomic Locations for LOC102724009 Gene
chr17:5,019,214-5,020,093
(GRCh38/hg38)
Size:
880 bases
Orientation:
Minus strand

Genomic View for LOC102724009 Gene

Genes around LOC102724009 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724009 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724009 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724009 Gene

Proteins for LOC102724009 Gene

Post-translational modifications for LOC102724009 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724009 Gene

Domains & Families for LOC102724009 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724009 Gene

Function for LOC102724009 Gene

Phenotypes From GWAS Catalog for LOC102724009 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724009 Gene

Localization for LOC102724009 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724009 Gene

Pathways & Interactions for LOC102724009 Gene

PathCards logo

SuperPathways for LOC102724009 Gene

No Data Available

Interacting Proteins for LOC102724009 Gene

Gene Ontology (GO) - Biological Process for LOC102724009 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724009 Gene

Drugs & Compounds for LOC102724009 Gene

No Compound Related Data Available

Transcripts for LOC102724009 Gene

mRNA/cDNA for LOC102724009 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724009 Gene

No ASD Table

Relevant External Links for LOC102724009 Gene

GeneLoc Exon Structure for
LOC102724009

Expression for LOC102724009 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724009 Gene

Orthologs for LOC102724009 Gene

Evolution for LOC102724009 Gene

ENSEMBL:
Gene Tree for LOC102724009 (if available)
TreeFam:
Gene Tree for LOC102724009 (if available)

No data available for Orthologs for LOC102724009 Gene

Paralogs for LOC102724009 Gene

No data available for Paralogs for LOC102724009 Gene

Variants for LOC102724009 Gene

Sequence variations from dbSNP and Humsavar for LOC102724009 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs148404628 benign, not specified, Ataxia, spastic, 2, autosomal recessive 5,020,485(-) T/A upstream_transcript_variant
rs78356534 likely-benign, benign, not specified, Ataxia, spastic, 2, autosomal recessive 5,020,556(-) G/A upstream_transcript_variant
rs181358276 likely-benign, not specified 5,020,697(-) C/A/T upstream_transcript_variant
rs188650236 likely-benign, not specified 5,020,692(-) A/C upstream_transcript_variant
rs752447534 likely-benign, not specified 5,020,033(-) A/G/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102724009 Gene

Variant ID Type Subtype PubMed ID
dgv5431n54 CNV loss 21841781
nsv574273 CNV gain 21841781
nsv833350 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102724009 Gene

Disorders for LOC102724009 Gene

No disorders were found for LOC102724009 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724009 Gene

Publications for LOC102724009 Gene

No publications were found for LOC102724009 Gene.

No data available for External Links for LOC102724009 Gene

Products for LOC102724009 Gene

Sources for LOC102724009 Gene

Content
Loading form....