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Aliases for LOC102724001 Gene

Subcategory (RNA class) for LOC102724001 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102724001 Gene

  • Uncharacterized LOC102724001 3

External Ids for LOC102724001 Gene

Previous GeneCards Identifiers for LOC102724001 Gene

  • GC15U901723
  • GC15M081709

Summaries for LOC102724001 Gene

GeneCards Summary for LOC102724001 Gene

LOC102724001 (Uncharacterized LOC102724001) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102724001 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724001 Gene

Genomics for LOC102724001 Gene

GeneHancer (GH) Regulatory Elements for LOC102724001 Gene

Promoters and enhancers for LOC102724001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J081951 Enhancer 1.1 Ensembl ENCODE 0.4 +16.1 16078 1 CBFA2T2 ZSCAN21 SP7 KLF14 ZNF680 SMARCA4 PKNOX1 ZNF488 IKZF1 ZBTB8A MEX3B ENSG00000259442 GC15P081965 LOC102724001 GC15P081930
GH15J081944 Enhancer 1.1 Ensembl ENCODE 0.3 +22.0 22028 1 CC2D1A CBFA2T2 ZNF148 MLLT1 TRIM24 EGR1 SMARCA4 MTA1 GMEB1 DPF2 MEX3B GC15P081930 GC15P081965 LOC102724001
GH15J081942 Enhancer 1.1 Ensembl ENCODE 0.3 +25.3 25253 1 CC2D1A CBFA2T2 ZNF148 ZNF121 TRIM24 SP7 SMARCA4 MTA1 ZNF488 DPF2 WHAMM GOLGA6L9 MEX3B ENSG00000237550 GC15P081930 GC15P081965 LOC102724001
GH15J081941 Enhancer 0.8 ENCODE 0.3 +26.6 26625 0.4 SP7 DPF2 ZEB2 ZNF639 ZNF629 HDAC1 ZNF692 ZBTB44 ZXDB ZSCAN5C MEX3B GC15P081930 GC15P081965 LOC102724001
GH15J081940 Enhancer 0.8 ENCODE 0.3 +26.3 26295 0 SMARCA4 DPF2 ZEB2 PKNOX1 ZNF629 HDAC1 ZNF692 NR2C1 EP300 ZXDB MEX3B GC15P081930 GC15P081965 LOC102724001
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102724001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102724001 Gene

Genomic Locations for LOC102724001 Gene
chr15:81,914,890-81,967,179
(GRCh38/hg38)
Size:
52,290 bases
Orientation:
Minus strand

Genomic View for LOC102724001 Gene

Genes around LOC102724001 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724001 Gene

Proteins for LOC102724001 Gene

Post-translational modifications for LOC102724001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724001 Gene

Domains & Families for LOC102724001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724001 Gene

Function for LOC102724001 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724001 Gene

Localization for LOC102724001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102724001 Gene

Pathways & Interactions for LOC102724001 Gene

PathCards logo

SuperPathways for LOC102724001 Gene

No Data Available

Interacting Proteins for LOC102724001 Gene

Gene Ontology (GO) - Biological Process for LOC102724001 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724001 Gene

Drugs & Compounds for LOC102724001 Gene

No Compound Related Data Available

Transcripts for LOC102724001 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724001 Gene

No ASD Table

Relevant External Links for LOC102724001 Gene

GeneLoc Exon Structure for
LOC102724001

No data available for mRNA/cDNA for LOC102724001 Gene

Expression for LOC102724001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724001 Gene

Orthologs for LOC102724001 Gene

No data available for Orthologs and Evolution for LOC102724001 Gene

Paralogs for LOC102724001 Gene

No data available for Paralogs for LOC102724001 Gene

Variants for LOC102724001 Gene

Sequence variations from dbSNP and Humsavar for LOC102724001 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000005773 -- 81,937,500(-) T/G intron_variant
rs1000037589 -- 81,895,207(-) T/A genic_downstream_transcript_variant, intron_variant
rs1000062222 -- 81,881,283(-) G/T genic_downstream_transcript_variant, intron_variant
rs1000079872 -- 81,892,569(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000082137 -- 81,889,042(-) T/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102724001 Gene

Disorders for LOC102724001 Gene

No disorders were found for LOC102724001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724001 Gene

Publications for LOC102724001 Gene

  1. A genome-wide association study of clinical symptoms of dissociation in a trauma-exposed sample. (PMID: 24677629) Wolf EJ … Miller MW (Depression and anxiety 2014) 3 58

No data available for External Links for LOC102724001 Gene

Products for LOC102724001 Gene

Sources for LOC102724001 Gene

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