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Aliases for LOC102723989 Gene

Subcategory (RNA class) for LOC102723989 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723989 Gene

  • Uncharacterized LOC102723989 3

External Ids for LOC102723989 Gene

Previous GeneCards Identifiers for LOC102723989 Gene

  • GC09U902086

Summaries for LOC102723989 Gene

GeneCards Summary for LOC102723989 Gene

LOC102723989 (Uncharacterized LOC102723989) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723989 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723989 Gene

Genomics for LOC102723989 Gene

GeneHancer (GH) Regulatory Elements for LOC102723989 Gene

Promoters and enhancers for LOC102723989 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J083219 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 +1.1 1137 3.3 ZNF652 ELF3 CTCF POLR2A SP5 RFX1 BACH1 REST GABPA IRF2 ENSG00000229109 LOC102723989 RASEF FRMD3 GC09P083268
GH09J083266 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.3 +47.3 47289 3.2 ELF3 CEBPG ZNF644 GATAD2A TGIF2 FOXA2 TFDP1 SAP130 TEAD1 ZNF792 GC09P083268 FRMD3 LOC102723989 ENSG00000229109
GH09J083208 Enhancer 0.6 Ensembl 0.4 -10.9 -10899 0.8 IKZF1 PKNOX1 SP1 HDAC1 GABPA ETV6 EP300 ESRRA NR2C2 NR2F2 ENSG00000273806 LOC102723989
GH09J083209 Enhancer 0.2 Ensembl 0.4 -10.0 -9999 0.6 LOC102723989 ENSG00000273806
GH09J083270 Enhancer 0.4 Ensembl 0.2 +51.0 51001 0.6 SOX13 NFIA ENSG00000237529 GC09P083268 LOC102723989 FRMD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723989 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723989 Gene

Genomic Locations for LOC102723989 Gene
chr9:83,219,300-83,270,833
(GRCh38/hg38)
Size:
51,534 bases
Orientation:
Plus strand

Genomic View for LOC102723989 Gene

Genes around LOC102723989 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723989 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723989 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723989 Gene

Proteins for LOC102723989 Gene

Post-translational modifications for LOC102723989 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723989 Gene

Domains & Families for LOC102723989 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723989 Gene

Function for LOC102723989 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723989 Gene

Localization for LOC102723989 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723989 Gene

Pathways & Interactions for LOC102723989 Gene

PathCards logo

SuperPathways for LOC102723989 Gene

No Data Available

Interacting Proteins for LOC102723989 Gene

Gene Ontology (GO) - Biological Process for LOC102723989 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723989 Gene

Drugs & Compounds for LOC102723989 Gene

No Compound Related Data Available

Transcripts for LOC102723989 Gene

mRNA/cDNA for LOC102723989 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723989 Gene

No ASD Table

Relevant External Links for LOC102723989 Gene

GeneLoc Exon Structure for
LOC102723989

Expression for LOC102723989 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723989 Gene

Orthologs for LOC102723989 Gene

No data available for Orthologs and Evolution for LOC102723989 Gene

Paralogs for LOC102723989 Gene

No data available for Paralogs for LOC102723989 Gene

Variants for LOC102723989 Gene

Sequence variations from dbSNP and Humsavar for LOC102723989 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000116725 -- 83,258,879(+) A/C/T intron_variant
rs1000135898 -- 83,265,301(+) G/A intron_variant
rs1000168236 -- 83,252,500(+) T/A intron_variant
rs1000191743 -- 83,227,119(+) G/A intron_variant
rs1000225935 -- 83,227,286(+) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723989 Gene

Disorders for LOC102723989 Gene

No disorders were found for LOC102723989 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723989 Gene

Publications for LOC102723989 Gene

No publications were found for LOC102723989 Gene.

No data available for External Links for LOC102723989 Gene

Products for LOC102723989 Gene

Sources for LOC102723989 Gene

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