Aliases for LOC102723935 Gene

Subcategory (RNA class) for LOC102723935 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723935 Gene

  • Uncharacterized LOC102723935 3

External Ids for LOC102723935 Gene

Previous GeneCards Identifiers for LOC102723935 Gene

  • GC01U903990

Summaries for LOC102723935 Gene

GeneCards Summary for LOC102723935 Gene

LOC102723935 (Uncharacterized LOC102723935) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723935 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102723935 Gene

Genomics for LOC102723935 Gene

GeneHancer (GH) Regulatory Elements for LOC102723935 Gene

Promoters and enhancers for LOC102723935 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J229258 Enhancer 1.1 Ensembl ENCODE dbSUPER 750.6 -1.9 -1903 1.6 CTCF CC2D1A RAD21 ZNF121 TEAD4 SP7 PPARG ARID2 REST TRIM22 LOC102723935 piR-48160 CCSAP ACTA1 RNU6-180P ENSG00000236975 ENSG00000237481 LOC105373159 ENSG00000177788
GH01J229252 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 +3.0 3043 3 CTCF ZBTB6 ATF1 NR2F6 ZNF362 RAD21 ZNF148 RERE SP7 ZSCAN21 NUP133 ACTA1 ENSG00000236975 CCSAP TAF5L URB2 RAB4A LOC102723935 TMEM78
GH01J229250 Enhancer 0.5 dbSUPER 0.4 +6.2 6202 0.6 MYC MAX ZNF121 ZNF512 ZSCAN4 ZNF366 TMEM78 ENSG00000236975 LOC102723935
GH01J229248 Enhancer 0.5 dbSUPER 0.4 +7.4 7425 0.8 ZBTB6 ZNF512 ZBTB17 ZNF366 MCM7 TMEM78 RAB4A ENSG00000233920 LOC102723935
GH01J229251 Enhancer 0.3 dbSUPER 0.4 +5.4 5396 0.6 HLF EZH2 TMEM78 LOC102723935
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723935 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723935 Gene

Genomic Locations for LOC102723935 Gene
chr1:229,242,988-229,256,698
(GRCh38/hg38)
Size:
13,711 bases
Orientation:
Minus strand

Genomic View for LOC102723935 Gene

Genes around LOC102723935 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723935 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723935 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723935 Gene

Proteins for LOC102723935 Gene

Post-translational modifications for LOC102723935 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723935 Gene

Domains & Families for LOC102723935 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102723935 Gene

Function for LOC102723935 Gene

Phenotypes From GWAS Catalog for LOC102723935 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723935 Gene

Localization for LOC102723935 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723935 Gene

Pathways & Interactions for LOC102723935 Gene

PathCards logo

SuperPathways for LOC102723935 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102723935 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723935 Gene

Drugs & Compounds for LOC102723935 Gene

No Compound Related Data Available

Transcripts for LOC102723935 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723935 Gene

No ASD Table

Relevant External Links for LOC102723935 Gene

GeneLoc Exon Structure for
LOC102723935

No data available for mRNA/cDNA for LOC102723935 Gene

Expression for LOC102723935 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723935 Gene

Orthologs for LOC102723935 Gene

No data available for Orthologs and Evolution for LOC102723935 Gene

Paralogs for LOC102723935 Gene

No data available for Paralogs for LOC102723935 Gene

Variants for LOC102723935 Gene

Sequence variations from dbSNP and Humsavar for LOC102723935 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000039697 -- 229,253,234(-) C/T intron_variant
rs1000096906 -- 229,253,201(-) CCCCCGCCC/CCC intron_variant
rs1000149374 -- 229,252,982(-) C/T intron_variant
rs1000180706 -- 229,240,181(-) G/T genic_downstream_transcript_variant, intron_variant
rs1000288830 -- 229,246,733(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723935 Gene

Disorders for LOC102723935 Gene

No disorders were found for LOC102723935 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723935 Gene

Publications for LOC102723935 Gene

No publications were found for LOC102723935 Gene.

No data available for External Links for LOC102723935 Gene

Products for LOC102723935 Gene

Sources for LOC102723935 Gene