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Aliases for LOC102723885 Gene

Subcategory (RNA class) for LOC102723885 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723885 Gene

  • Uncharacterized LOC102723885 3

External Ids for LOC102723885 Gene

Previous GeneCards Identifiers for LOC102723885 Gene

  • GC07U903756

Summaries for LOC102723885 Gene

GeneCards Summary for LOC102723885 Gene

LOC102723885 (Uncharacterized LOC102723885) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723885 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723885 Gene

Genomics for LOC102723885 Gene

GeneHancer (GH) Regulatory Elements for LOC102723885 Gene

Promoters and enhancers for LOC102723885 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J088217 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.7 +2.9 2892 4.1 SP1 ZFX SIX5 NKRF POLR2A ZNF384 ZNF687 MAFK MYC YY1 SRI ENSG00000228113 DBF4 LOC102723885 ENSG00000254003
GH07J088224 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 +9.7 9734 3.4 CEBPG RERE NCOA3 MAFK ELF1 SP1 HNF1A ZNF384 FOSL2 CREB1 SRI ENSG00000228113 LOC102723885 GC07M088224
GH07J088228 Enhancer 0.6 Ensembl ENCODE 0.4 +12.9 12882 2.1 TRIM24 TRIM28 ATF2 GC07M088230 SRI ENSG00000228113 LOC102723885 GC07M088224
GH07J088202 Enhancer 0.6 Ensembl 0.4 -13.8 -13764 0.6 IKZF1 BACH1 PKNOX1 DPF2 POLR2A NR2F1 NBN ZNF217 PIR58316 GC07M088203 GC07P088199 LOC102723885 ENSG00000254003 ADAM22
GH07J088213 Enhancer 0.2 Ensembl 0.7 -3.2 -3159 0.6 ENSG00000254003 LOC102723885 SRI PIR58316 GC07M088203
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723885 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723885 Gene

Genomic Locations for LOC102723885 Gene
chr7:88,216,660-88,229,768
(GRCh38/hg38)
Size:
13,109 bases
Orientation:
Plus strand

Genomic View for LOC102723885 Gene

Genes around LOC102723885 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723885 Gene

Proteins for LOC102723885 Gene

Post-translational modifications for LOC102723885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723885 Gene

Domains & Families for LOC102723885 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723885 Gene

Function for LOC102723885 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723885 Gene

Localization for LOC102723885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723885 Gene

Pathways & Interactions for LOC102723885 Gene

PathCards logo

SuperPathways for LOC102723885 Gene

No Data Available

Interacting Proteins for LOC102723885 Gene

Gene Ontology (GO) - Biological Process for LOC102723885 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723885 Gene

Drugs & Compounds for LOC102723885 Gene

No Compound Related Data Available

Transcripts for LOC102723885 Gene

mRNA/cDNA for LOC102723885 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723885 Gene

No ASD Table

Relevant External Links for LOC102723885 Gene

GeneLoc Exon Structure for
LOC102723885

Expression for LOC102723885 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723885 Gene

Orthologs for LOC102723885 Gene

No data available for Orthologs and Evolution for LOC102723885 Gene

Paralogs for LOC102723885 Gene

No data available for Paralogs for LOC102723885 Gene

Variants for LOC102723885 Gene

Sequence variations from dbSNP and Humsavar for LOC102723885 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000317431 -- 88,221,600(+) A/C intron_variant
rs1000369871 -- 88,221,128(+) T/G intron_variant
rs1000410837 -- 88,224,814(+) C/T intron_variant
rs1000477239 -- 88,227,323(+) A/T intron_variant
rs1000529454 -- 88,220,345(+) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723885 Gene

Disorders for LOC102723885 Gene

No disorders were found for LOC102723885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723885 Gene

Publications for LOC102723885 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

No data available for External Links for LOC102723885 Gene

Products for LOC102723885 Gene

Sources for LOC102723885 Gene

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