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Aliases for LOC102723883 Gene

Subcategory (RNA class) for LOC102723883 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723883 Gene

  • Uncharacterized LOC102723883 3
  • Novel Transcript 5
  • AL646090.1 5

External Ids for LOC102723883 Gene

Previous GeneCards Identifiers for LOC102723883 Gene

  • GC06P068040

Summaries for LOC102723883 Gene

GeneCards Summary for LOC102723883 Gene

LOC102723883 (Uncharacterized LOC102723883) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723883 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723883 Gene

Genomics for LOC102723883 Gene

GeneHancer (GH) Regulatory Elements for LOC102723883 Gene

Promoters and enhancers for LOC102723883 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J068038 Promoter/Enhancer 1.3 Ensembl ENCODE 4.6 -15.4 -15387 3.3 CC2D1A ZKSCAN8 MLLT1 GTF2F1 SMARCA4 GMEB1 IKZF1 ATF1 ZNF740 EP300 ENSG00000285838 LOC102723883 LOC105377844
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723883 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723883 Gene

Genomic Locations for LOC102723883 Gene
chr6:68,055,351-68,060,502
(GRCh38/hg38)
Size:
5,152 bases
Orientation:
Plus strand
chr6:68,765,243-68,770,394
(GRCh37/hg19)
Size:
5,152 bases
Orientation:
Plus strand

Genomic View for LOC102723883 Gene

Genes around LOC102723883 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723883 Gene

Proteins for LOC102723883 Gene

Post-translational modifications for LOC102723883 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723883 Gene

Domains & Families for LOC102723883 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723883 Gene

Function for LOC102723883 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723883 Gene

Localization for LOC102723883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723883 Gene

Pathways & Interactions for LOC102723883 Gene

PathCards logo

SuperPathways for LOC102723883 Gene

No Data Available

Interacting Proteins for LOC102723883 Gene

Gene Ontology (GO) - Biological Process for LOC102723883 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723883 Gene

Drugs & Compounds for LOC102723883 Gene

No Compound Related Data Available

Transcripts for LOC102723883 Gene

mRNA/cDNA for LOC102723883 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723883 Gene

No ASD Table

Relevant External Links for LOC102723883 Gene

GeneLoc Exon Structure for
LOC102723883

Expression for LOC102723883 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723883 Gene

Orthologs for LOC102723883 Gene

Evolution for LOC102723883 Gene

ENSEMBL:
Gene Tree for LOC102723883 (if available)
TreeFam:
Gene Tree for LOC102723883 (if available)

No data available for Orthologs for LOC102723883 Gene

Paralogs for LOC102723883 Gene

No data available for Paralogs for LOC102723883 Gene

Variants for LOC102723883 Gene

Sequence variations from dbSNP and Humsavar for LOC102723883 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000828161 -- 68,057,126(+) T/C intron_variant
rs1001364795 -- 68,056,933(+) A/C intron_variant
rs1001560923 -- 68,059,930(+) G/A intron_variant
rs1001737432 -- 68,057,507(+) A/G intron_variant
rs1001747231 -- 68,057,686(+) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723883 Gene

Variant ID Type Subtype PubMed ID
esv2752129 CNV gain 17911159
esv2763968 CNV gain+loss 21179565
nsv1027923 CNV loss 25217958
nsv603589 CNV loss 21841781
nsv603605 CNV gain 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723883 Gene

Disorders for LOC102723883 Gene

No disorders were found for LOC102723883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723883 Gene

Publications for LOC102723883 Gene

No publications were found for LOC102723883 Gene.

No data available for External Links for LOC102723883 Gene

Products for LOC102723883 Gene

Sources for LOC102723883 Gene

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