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Aliases for LOC102723838 Gene

Subcategory (RNA class) for LOC102723838 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723838 Gene

  • Uncharacterized LOC102723838 3

External Ids for LOC102723838 Gene

Previous GeneCards Identifiers for LOC102723838 Gene

  • GC11U902143
  • GC11P102467

Summaries for LOC102723838 Gene

GeneCards Summary for LOC102723838 Gene

LOC102723838 (Uncharacterized LOC102723838) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723838 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723838 Gene

Genomics for LOC102723838 Gene

GeneHancer (GH) Regulatory Elements for LOC102723838 Gene

Promoters and enhancers for LOC102723838 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J102493 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 +1.2 1163 2.9 CC2D1A CTCF ELF3 CEBPG RERE ZNF24 SP1 HNF1A PPARG SP5 LOC102723838 TMEM123 ENSG00000255337 ENSG00000256916 MMP20 MMP7 BIRC2 ENSG00000255482
GH11J102476 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -16.9 -16887 2.2 ZNF652 ZFX ELF3 ZKSCAN8 CEBPG TFE3 SP1 HNF1A PPARG SP5 ENSG00000255337 BIRC2 DYNC2H1 MMP7 MMP20 CFAP300 ENSG00000256916 MMP1 TMEM123 ENSG00000255482
GH11J102489 Enhancer 0.7 Ensembl dbSUPER 0.7 -4.3 -4279 1 PKNOX1 RXRB JUNB DMAP1 THRB NFYC ENSG00000255482 ENSG00000255337 ENSG00000256916 MMP20 BIRC2 MMP7 LOC102723838 TMEM123
GH11J102530 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.3 +36.5 36540 2.2 MLLT1 ZBTB33 ELF1 SMARCA5 ZNF335 JUN ATF7 DACH1 MMP7 MMP20 LOC102723838
GH11J102478 Enhancer 0.6 Ensembl dbSUPER 0.4 -14.8 -14779 1.6 ZNF316 MAFG HLF ENSG00000255337 BIRC2 MMP7 MMP20 ENSG00000256916 MMP1 TMEM123 LOC102723838 ENSG00000255482
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723838 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723838 Gene

Genomic Locations for LOC102723838 Gene
chr11:102,493,780-102,498,801
(GRCh38/hg38)
Size:
5,022 bases
Orientation:
Plus strand

Genomic View for LOC102723838 Gene

Genes around LOC102723838 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723838 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723838 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723838 Gene

Proteins for LOC102723838 Gene

Post-translational modifications for LOC102723838 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723838 Gene

Domains & Families for LOC102723838 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723838 Gene

Function for LOC102723838 Gene

Phenotypes From GWAS Catalog for LOC102723838 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723838 Gene

Localization for LOC102723838 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723838 Gene

Pathways & Interactions for LOC102723838 Gene

PathCards logo

SuperPathways for LOC102723838 Gene

No Data Available

Interacting Proteins for LOC102723838 Gene

Gene Ontology (GO) - Biological Process for LOC102723838 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723838 Gene

Drugs & Compounds for LOC102723838 Gene

No Compound Related Data Available

Transcripts for LOC102723838 Gene

mRNA/cDNA for LOC102723838 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723838 Gene

No ASD Table

Relevant External Links for LOC102723838 Gene

GeneLoc Exon Structure for
LOC102723838

Expression for LOC102723838 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723838 Gene

Orthologs for LOC102723838 Gene

No data available for Orthologs and Evolution for LOC102723838 Gene

Paralogs for LOC102723838 Gene

No data available for Paralogs for LOC102723838 Gene

Variants for LOC102723838 Gene

Sequence variations from dbSNP and Humsavar for LOC102723838 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000170514 -- 102,484,279(+) A/G intron_variant
rs1000200825 -- 102,467,483(+) A/G intron_variant
rs1000354243 -- 102,489,985(+) C/T intron_variant
rs1000409346 -- 102,482,025(+) T/A intron_variant
rs1000486253 -- 102,495,973(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723838 Gene

Disorders for LOC102723838 Gene

No disorders were found for LOC102723838 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723838 Gene

Publications for LOC102723838 Gene

No publications were found for LOC102723838 Gene.

No data available for External Links for LOC102723838 Gene

Products for LOC102723838 Gene

Sources for LOC102723838 Gene

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