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Aliases for LOC102723831 Gene

Subcategory (RNA class) for LOC102723831 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723831 Gene

  • Uncharacterized LOC102723831 3

External Ids for LOC102723831 Gene

Summaries for LOC102723831 Gene

GeneCards Summary for LOC102723831 Gene

LOC102723831 (Uncharacterized LOC102723831) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723831 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723831 Gene

Genomics for LOC102723831 Gene

GeneHancer (GH) Regulatory Elements for LOC102723831 Gene

Promoters and enhancers for LOC102723831 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J151228 Enhancer 1.1 Ensembl ENCODE 600.7 -1.2 -1188 1.7 ZFX SIX5 MLLT1 NCOA6 TRIM24 ZNF639 EGR1 SMARCA4 MTA1 GMEB1 LOC102723831 ENSG00000223598 HSPA8P15 RNU6-300P ENSG00000231883 ZBTB2 AKAP12
GH06J151208 Enhancer 0.8 ENCODE 0.3 +20.1 20056 0.2 ELF3 CEBPG TFE3 ZNF644 SOX13 CEBPA GATAD2A TCF7 ZKSCAN8 FOXA2 AKAP12 RNU6-300P ENSG00000213087 LOC102723831 ENSG00000223598
GH06J151209 Enhancer 0.6 ENCODE 0.4 +19.0 18976 0.2 NFE2 OSR2 ZBTB17 MAFG SAP130 ZNF274 XRCC5 ETV4 ETV5 EMSY HSPA8P15 RNU6-300P ENSG00000223598 ENSG00000213087 LOC102723831
GH06J151210 Enhancer 0.5 ENCODE 0.4 +18.6 18636 0.2 OSR2 ZBTB17 SAP130 ZNF274 XRCC5 ETV4 ETV5 HSPA8P15 AKAP12 RNU6-300P ENSG00000213087 ENSG00000223598 LOC102723831
GH06J151216 Enhancer 0.4 Ensembl 0.4 +11.8 11756 0.6 CREB1 POLR2A ZNF335 AKAP12 ENSG00000213087 LOC102723831 ENSG00000223598 RNU6-300P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723831 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723831 Gene

Genomic Locations for LOC102723831 Gene
chr6:151,196,673-151,228,457
(GRCh38/hg38)
Size:
31,785 bases
Orientation:
Minus strand

Genomic View for LOC102723831 Gene

Genes around LOC102723831 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723831 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723831 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723831 Gene

Proteins for LOC102723831 Gene

Post-translational modifications for LOC102723831 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723831 Gene

Domains & Families for LOC102723831 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723831 Gene

Function for LOC102723831 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723831 Gene

Localization for LOC102723831 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723831 Gene

Pathways & Interactions for LOC102723831 Gene

PathCards logo

SuperPathways for LOC102723831 Gene

No Data Available

Interacting Proteins for LOC102723831 Gene

Gene Ontology (GO) - Biological Process for LOC102723831 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723831 Gene

Drugs & Compounds for LOC102723831 Gene

No Compound Related Data Available

Transcripts for LOC102723831 Gene

mRNA/cDNA for LOC102723831 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723831 Gene

No ASD Table

Relevant External Links for LOC102723831 Gene

GeneLoc Exon Structure for
LOC102723831

Expression for LOC102723831 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723831 Gene

Orthologs for LOC102723831 Gene

No data available for Orthologs and Evolution for LOC102723831 Gene

Paralogs for LOC102723831 Gene

No data available for Paralogs for LOC102723831 Gene

Variants for LOC102723831 Gene

Sequence variations from dbSNP and Humsavar for LOC102723831 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000096556 -- 151,199,860(-) T/G intron_variant
rs1000245315 -- 151,220,237(-) C/T intron_variant
rs1000273410 -- 151,218,111(-) G/A/C intron_variant
rs1000309620 -- 151,214,198(-) G/T intron_variant
rs1000393643 -- 151,218,348(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723831 Gene

Variant ID Type Subtype PubMed ID
esv2662175 CNV deletion 23128226
esv2732896 CNV deletion 23290073
esv3382523 CNV insertion 20981092
esv3611254 CNV loss 21293372
esv3611256 CNV loss 21293372
nsv1021285 CNV gain 25217958
nsv981197 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723831 Gene

Disorders for LOC102723831 Gene

No disorders were found for LOC102723831 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723831 Gene

Publications for LOC102723831 Gene

No publications were found for LOC102723831 Gene.

No data available for External Links for LOC102723831 Gene

Products for LOC102723831 Gene

Sources for LOC102723831 Gene

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