Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC102723825 Gene

Subcategory (RNA class) for LOC102723825 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723825 Gene

  • Uncharacterized LOC102723825 3

External Ids for LOC102723825 Gene

Previous GeneCards Identifiers for LOC102723825 Gene

  • GC02U902927

Summaries for LOC102723825 Gene

GeneCards Summary for LOC102723825 Gene

LOC102723825 (Uncharacterized LOC102723825) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723825 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723825 Gene

Genomics for LOC102723825 Gene

GeneHancer (GH) Regulatory Elements for LOC102723825 Gene

Promoters and enhancers for LOC102723825 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J240392 Enhancer 0.5 Ensembl ENCODE 600.7 -1.4 -1381 1.6 MNT LOC102723825 GPC1
GH02J240389 Enhancer 0.2 Ensembl 600.7 +0.8 819 2 LOC102723825 GPC1 GPR35 ENSG00000276366
GH02J240368 Enhancer 1.9 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.4 +19.4 19410 7.2 MAFK SP1 CEBPG RXRA ZIC2 CEBPB ZFX CHD2 JUN TCF7 GPC1 LOC102723825 ENSG00000276366
GH02J240387 Enhancer 1 ENCODE dbSUPER 0.7 +3.3 3326 1.8 ZNF384 BACH1 MAFK TRIM24 SMARCA4 FOSL2 DPF2 IKZF1 ZBTB33 NFE2L2 GPC1 LOC102723825 ENSG00000276366
GH02J240426 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -35.9 -35921 1.4 CREB1 PRDM10 ZIC2 ATF1 PKNOX1 ATF7 ZNF629 ZNF692 BRCA1 CEBPB GPC1 GPR35 LOC102723825
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723825 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723825 Gene

Genomic Locations for LOC102723825 Gene
chr2:240,384,284-240,391,219
(GRCh38/hg38)
Size:
6,936 bases
Orientation:
Minus strand

Genomic View for LOC102723825 Gene

Genes around LOC102723825 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723825 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723825 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723825 Gene

Proteins for LOC102723825 Gene

Post-translational modifications for LOC102723825 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723825 Gene

Domains & Families for LOC102723825 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723825 Gene

Function for LOC102723825 Gene

Phenotypes From GWAS Catalog for LOC102723825 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723825 Gene

Localization for LOC102723825 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723825 Gene

Pathways & Interactions for LOC102723825 Gene

PathCards logo

SuperPathways for LOC102723825 Gene

No Data Available

Interacting Proteins for LOC102723825 Gene

Gene Ontology (GO) - Biological Process for LOC102723825 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723825 Gene

Drugs & Compounds for LOC102723825 Gene

No Compound Related Data Available

Transcripts for LOC102723825 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723825 Gene

No ASD Table

Relevant External Links for LOC102723825 Gene

GeneLoc Exon Structure for
LOC102723825

No data available for mRNA/cDNA for LOC102723825 Gene

Expression for LOC102723825 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723825 Gene

Orthologs for LOC102723825 Gene

No data available for Orthologs and Evolution for LOC102723825 Gene

Paralogs for LOC102723825 Gene

No data available for Paralogs for LOC102723825 Gene

Variants for LOC102723825 Gene

Sequence variations from dbSNP and Humsavar for LOC102723825 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000426821 -- 240,390,776(-) C/T genic_upstream_transcript_variant, intron_variant
rs1001028707 -- 240,389,730(-) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001931282 -- 240,393,208(-) G/A upstream_transcript_variant
rs1001952643 -- 240,387,530(-) G/A intron_variant
rs1001962400 -- 240,393,063(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723825 Gene

Disorders for LOC102723825 Gene

No disorders were found for LOC102723825 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723825 Gene

Publications for LOC102723825 Gene

No publications were found for LOC102723825 Gene.

No data available for External Links for LOC102723825 Gene

Products for LOC102723825 Gene

Sources for LOC102723825 Gene

Content
Loading form....