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Aliases for LOC102723824 Gene

Subcategory (RNA class) for LOC102723824 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723824 Gene

  • Uncharacterized LOC102723824 3

External Ids for LOC102723824 Gene

Summaries for LOC102723824 Gene

GeneCards Summary for LOC102723824 Gene

LOC102723824 (Uncharacterized LOC102723824) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723824 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723824 Gene

Genomics for LOC102723824 Gene

GeneHancer (GH) Regulatory Elements for LOC102723824 Gene

Promoters and enhancers for LOC102723824 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J042168 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 -0.8 -770 5.6 SP1 ZFX ELF3 MNT ZNF148 NKRF POLR2A ZNF121 RERE ZNF687 EML4 ENSG00000224875 LOC102723824 COX7A2L LINC01914 GC02M042233
GH02J042140 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 +28.3 28290 3.8 ELF3 CEBPG RERE ZNF384 MAFK TFE3 YY1 TRIM24 SP7 PPARG EML4 COX7A2L ENSG00000224875 OXER1 HAAO LOC102723824 LOC105374531
GH02J042147 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +22.3 22330 1.4 SP1 ZNF384 RXRA CEBPA GATAD2A KMT2B CEBPB JUND YY1 TEAD1 EML4 ENSG00000224875 LOC102723824 LOC105374531
GH02J042167 Enhancer 0.5 Ensembl 0.7 +2.5 2530 0.2 PRDM10 USF1 USF2 TEAD3 CREB1 EML4 LOC102723824 ENSG00000224875 LOC105374531
GH02J042163 Enhancer 0.4 Ensembl ENCODE 0.4 +6.7 6655 1 EML4 LOC102723824 ENSG00000224875 LOC105374531
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723824 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723824 Gene

Genomic Locations for LOC102723824 Gene
chr2:42,142,435-42,170,231
(GRCh38/hg38)
Size:
27,797 bases
Orientation:
Minus strand

Genomic View for LOC102723824 Gene

Genes around LOC102723824 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723824 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723824 Gene

Proteins for LOC102723824 Gene

Post-translational modifications for LOC102723824 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723824 Gene

Domains & Families for LOC102723824 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723824 Gene

Function for LOC102723824 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723824 Gene

Localization for LOC102723824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723824 Gene

Pathways & Interactions for LOC102723824 Gene

PathCards logo

SuperPathways for LOC102723824 Gene

No Data Available

Interacting Proteins for LOC102723824 Gene

Gene Ontology (GO) - Biological Process for LOC102723824 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723824 Gene

Drugs & Compounds for LOC102723824 Gene

No Compound Related Data Available

Transcripts for LOC102723824 Gene

mRNA/cDNA for LOC102723824 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723824 Gene

No ASD Table

Relevant External Links for LOC102723824 Gene

GeneLoc Exon Structure for
LOC102723824

Expression for LOC102723824 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723824 Gene

Orthologs for LOC102723824 Gene

No data available for Orthologs and Evolution for LOC102723824 Gene

Paralogs for LOC102723824 Gene

No data available for Paralogs for LOC102723824 Gene

Variants for LOC102723824 Gene

Sequence variations from dbSNP and Humsavar for LOC102723824 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000151896 -- 42,150,102(-) AAAAAAAA/AAAAAAAAA intron_variant
rs1000218026 -- 42,157,450(-) G/ intron_variant
rs1000347624 -- 42,152,936(-) A/G intron_variant
rs1000398027 -- 42,147,082(-) A/G intron_variant
rs1000527767 -- 42,145,464(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723824 Gene

Variant ID Type Subtype PubMed ID
esv2763299 CNV gain+loss 21179565
nsv1012527 CNV gain 25217958
nsv476031 CNV novel sequence insertion 20440878
nsv999503 CNV loss 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723824 Gene

Disorders for LOC102723824 Gene

No disorders were found for LOC102723824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723824 Gene

Publications for LOC102723824 Gene

No publications were found for LOC102723824 Gene.

No data available for External Links for LOC102723824 Gene

Products for LOC102723824 Gene

Sources for LOC102723824 Gene

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