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Aliases for LOC102723716 Gene

Subcategory (RNA class) for LOC102723716 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102723716 Gene

  • Uncharacterized LOC102723716 3
  • AC087623.1 5

External Ids for LOC102723716 Gene

Previous GeneCards Identifiers for LOC102723716 Gene

  • GC08U901862

Summaries for LOC102723716 Gene

GeneCards Summary for LOC102723716 Gene

LOC102723716 (Uncharacterized LOC102723716) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723716 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723716 Gene

Genomics for LOC102723716 Gene

GeneHancer (GH) Regulatory Elements for LOC102723716 Gene

Promoters and enhancers for LOC102723716 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I038400 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.5 -1526 9.5 FOXA2 PKNOX1 ZNF143 ATF7 FOS RUNX3 PAF1 RXRA JUNB PPARG LOC102723716 DDHD2 FGFR1 RNU6-323P C8orf86 PLEKHA2 TACC1 ENSG00000272159 LETM2
GH08I037693 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 20.4 +706.4 706370 7.9 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF213 ZNF703 ERLIN2 ADGRA2 DDHD2 RPS20P22 ENSG00000255201 LOC728024 FGFR1 LOC102723716 NSD3
GH08I038379 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.1 +20.4 20408 8.1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 ZNF263 SP3 NFYC NSD3 LETM2 ENSG00000272092 DDHD2 RPS20P22 ERLIN2 ASH2L TM2D2 ENSG00000255201 LOC102723716
GH08I037514 Enhancer 1.5 FANTOM5 Ensembl ENCODE 20.2 +887.9 887878 3.9 PKNOX1 FOXA2 ARID4B FEZF1 ZNF2 YY1 ZNF213 ZNF302 ZNF548 FOS ENSG00000253414 DDHD2 RPS20P22 ERLIN2 ENSG00000255201 LOC728024 ENSG00000272128 LOC102723716 ADGRA2 NSD3
GH08I037603 Enhancer 1.4 Ensembl ENCODE dbSUPER 21.6 +799.4 799437 1.2 PKNOX1 FOXA2 MLX ZNF493 ZNF133 ARID4B DMAP1 ZNF2 ZNF48 ETS1 DDHD2 RPS20P22 NSD3 ERLIN2 ADGRA2 LOC102723716 FGFR1 ENSG00000255201 ENSG00000260949 ENSG00000272128
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC102723716 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723716 Gene

Genomic Locations for LOC102723716 Gene
chr8:38,400,416-38,403,940
(GRCh38/hg38)
Size:
3,525 bases
Orientation:
Minus strand

Genomic View for LOC102723716 Gene

Genes around LOC102723716 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723716 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723716 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723716 Gene

Proteins for LOC102723716 Gene

Post-translational modifications for LOC102723716 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723716 Gene

Domains & Families for LOC102723716 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723716 Gene

Function for LOC102723716 Gene

Phenotypes From GWAS Catalog for LOC102723716 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723716 Gene

Localization for LOC102723716 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723716 Gene

Pathways & Interactions for LOC102723716 Gene

SuperPathways for LOC102723716 Gene

No Data Available

Interacting Proteins for LOC102723716 Gene

Gene Ontology (GO) - Biological Process for LOC102723716 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723716 Gene

Drugs & Compounds for LOC102723716 Gene

No Compound Related Data Available

Transcripts for LOC102723716 Gene

mRNA/cDNA for LOC102723716 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723716 Gene

No ASD Table

Relevant External Links for LOC102723716 Gene

GeneLoc Exon Structure for
LOC102723716

Expression for LOC102723716 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102723716 Gene

genes like me logo Genes that share expression patterns with LOC102723716: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723716 Gene

Orthologs for LOC102723716 Gene

Evolution for LOC102723716 Gene

ENSEMBL:
Gene Tree for LOC102723716 (if available)
TreeFam:
Gene Tree for LOC102723716 (if available)

No data available for Orthologs for LOC102723716 Gene

Paralogs for LOC102723716 Gene

No data available for Paralogs for LOC102723716 Gene

Variants for LOC102723716 Gene

Sequence variations from dbSNP and Humsavar for LOC102723716 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000365460 -- 38,402,697(-) T/C upstream_transcript_variant
rs1000633807 -- 38,402,167(-) G/C non_coding_transcript_variant
rs1002235766 -- 38,403,812(-) T/C upstream_transcript_variant
rs1002309531 -- 38,403,573(-) G/A upstream_transcript_variant
rs1003467515 -- 38,400,246(-) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723716 Gene

Disorders for LOC102723716 Gene

No disorders were found for LOC102723716 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723716 Gene

Publications for LOC102723716 Gene

No publications were found for LOC102723716 Gene.

Products for LOC102723716 Gene

Sources for LOC102723716 Gene

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