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Aliases for LOC102723709 Gene

Subcategory (RNA class) for LOC102723709 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723709 Gene

  • Uncharacterized LOC102723709 3

External Ids for LOC102723709 Gene

Summaries for LOC102723709 Gene

GeneCards Summary for LOC102723709 Gene

LOC102723709 (Uncharacterized LOC102723709) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723709 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723709 Gene

Genomics for LOC102723709 Gene

GeneHancer (GH) Regulatory Elements for LOC102723709 Gene

Promoters and enhancers for LOC102723709 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J067711 Promoter 0.6 Ensembl 600.7 +0.4 424 2.2 ZFHX2 LOC102723709 ENSG00000286079
GH09J067707 Enhancer 0.2 Ensembl 0.7 -4.6 -4576 0.2 LOC102723709 ENSG00000275904
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723709 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723709 Gene

Genomic Locations for LOC102723709 Gene
chr9:67,711,677-67,713,733
(GRCh38/hg38)
Size:
2,057 bases
Orientation:
Plus strand

Genomic View for LOC102723709 Gene

Genes around LOC102723709 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723709 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723709 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723709 Gene

Proteins for LOC102723709 Gene

Post-translational modifications for LOC102723709 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723709 Gene

Domains & Families for LOC102723709 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723709 Gene

Function for LOC102723709 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723709 Gene

Localization for LOC102723709 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723709 Gene

Pathways & Interactions for LOC102723709 Gene

PathCards logo

SuperPathways for LOC102723709 Gene

No Data Available

Interacting Proteins for LOC102723709 Gene

Gene Ontology (GO) - Biological Process for LOC102723709 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723709 Gene

Drugs & Compounds for LOC102723709 Gene

No Compound Related Data Available

Transcripts for LOC102723709 Gene

mRNA/cDNA for LOC102723709 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723709 Gene

No ASD Table

Relevant External Links for LOC102723709 Gene

GeneLoc Exon Structure for
LOC102723709

Expression for LOC102723709 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723709 Gene

Orthologs for LOC102723709 Gene

No data available for Orthologs and Evolution for LOC102723709 Gene

Paralogs for LOC102723709 Gene

No data available for Paralogs for LOC102723709 Gene

Variants for LOC102723709 Gene

Sequence variations from dbSNP and Humsavar for LOC102723709 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000392259 -- 67,713,123(+) G/C/T intron_variant
rs1007204666 -- 67,712,947(+) C/T intron_variant
rs1007235896 -- 67,712,353(+) C/G/T non_coding_transcript_variant
rs1014346123 -- 67,714,054(+) G/T downstream_transcript_variant
rs1014377212 -- 67,713,176(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723709 Gene

Variant ID Type Subtype PubMed ID
dgv1348e199 CNV deletion 23128226
dgv36n14 CNV gain 18776910
dgv7604n100 CNV gain 25217958
esv1007212 CNV gain 20482838
esv2672729 CNV deletion 23128226
esv28583 CNV gain+loss 19812545
esv996891 CNV gain 20482838
nsv1075634 CNV deletion 25765185
nsv469618 CNV gain+loss 16826518
nsv831586 CNV loss 17160897
nsv831587 CNV loss 17160897
nsv8471 CNV gain 18304495
nsv8474 CNV gain+loss 18304495
nsv8503 CNV gain 18304495
nsv951148 CNV deletion 24416366
nsv951169 CNV deletion 24416366
nsv968661 CNV duplication 23825009
nsv982258 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723709 Gene

Disorders for LOC102723709 Gene

No disorders were found for LOC102723709 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723709 Gene

Publications for LOC102723709 Gene

No publications were found for LOC102723709 Gene.

No data available for External Links for LOC102723709 Gene

Products for LOC102723709 Gene

Sources for LOC102723709 Gene

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