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Aliases for LOC102723701 Gene

Subcategory (RNA class) for LOC102723701 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723701 Gene

  • Uncharacterized LOC102723701 3
  • AC138356.1 5

External Ids for LOC102723701 Gene

Previous GeneCards Identifiers for LOC102723701 Gene

  • GC08U901846

Summaries for LOC102723701 Gene

GeneCards Summary for LOC102723701 Gene

LOC102723701 (Uncharacterized LOC102723701) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723701 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723701 Gene

Genomics for LOC102723701 Gene

GeneHancer (GH) Regulatory Elements for LOC102723701 Gene

Promoters and enhancers for LOC102723701 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J037735 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.1 -55 3.2 PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 ERLIN2 LOC102723701 NSD3 DDHD2 PIR42174 GC08M037706
GH08J037761 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.3 -25.5 -25461 2.2 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 ZNF143 PLPBP DDHD2 ERLIN2 ADGRA2 ASH2L ENSG00000255201 BRF2 LOC728024 LOC102723701 RAB11FIP1
GH08J037588 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.6 +141.8 141830 13.7 PKNOX1 FOXA2 MLX ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 ZNF703 LOC105379379 LINC01605 ENSG00000253388 ENSG00000253414 DDHD2 LOC728024 ERLIN2 LOC102723701 RAB11FIP1
GH08J037573 Enhancer 1.2 FANTOM5 Ensembl ENCODE 9.8 +163.0 162950 1.3 PKNOX1 BACH1 STAT5A BMI1 IRF4 RELA EED ATF7 ETV6 BCLAF1 LINC01605 ENSG00000254290 ENSG00000253414 ENSG00000253388 ZNF703 ERLIN2 LOC102723701 RAB11FIP1 LOC105379378 LOC105379379
GH08J037790 Enhancer 1.1 Ensembl ENCODE dbSUPER 9.8 -53.7 -53737 1.9 PKNOX1 ZBTB6 ZIC2 ZNF335 ZNF316 RCOR1 IKZF2 CHD2 ZNF362 ZNF148 GOT1L1 RAB11FIP1 ERLIN2 LOC102723701 LOC105379381 ADGRA2 GC08M037706
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723701 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723701 Gene

Genomic Locations for LOC102723701 Gene
chr8:37,734,761-37,737,426
(GRCh38/hg38)
Size:
2,666 bases
Orientation:
Minus strand

Genomic View for LOC102723701 Gene

Genes around LOC102723701 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723701 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723701 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723701 Gene

Proteins for LOC102723701 Gene

Post-translational modifications for LOC102723701 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723701 Gene

Domains & Families for LOC102723701 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723701 Gene

Function for LOC102723701 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723701 Gene

Localization for LOC102723701 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723701 Gene

Pathways & Interactions for LOC102723701 Gene

SuperPathways for LOC102723701 Gene

No Data Available

Interacting Proteins for LOC102723701 Gene

Gene Ontology (GO) - Biological Process for LOC102723701 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723701 Gene

Drugs & Compounds for LOC102723701 Gene

No Compound Related Data Available

Transcripts for LOC102723701 Gene

mRNA/cDNA for LOC102723701 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723701 Gene

No ASD Table

Relevant External Links for LOC102723701 Gene

GeneLoc Exon Structure for
LOC102723701

Expression for LOC102723701 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102723701 Gene

genes like me logo Genes that share expression patterns with LOC102723701: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723701 Gene

Orthologs for LOC102723701 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LOC102723701 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 100 (a)
OneToOne
Species where no ortholog for LOC102723701 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LOC102723701 Gene

ENSEMBL:
Gene Tree for LOC102723701 (if available)
TreeFam:
Gene Tree for LOC102723701 (if available)

Paralogs for LOC102723701 Gene

No data available for Paralogs for LOC102723701 Gene

Variants for LOC102723701 Gene

Sequence variations from dbSNP and Humsavar for LOC102723701 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs886041612 pathogenic, not provided 37,737,939(-) C/ upstream_transcript_variant
rs1057521811 likely-benign, not specified 37,736,652(-) G/C non_coding_transcript_variant
rs886042197 uncertain-significance, not specified 37,737,958(-) C/A upstream_transcript_variant
rs1001107253 -- 37,736,384(-) G/A non_coding_transcript_variant
rs1002119592 -- 37,737,501(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC102723701 Gene

Variant ID Type Subtype PubMed ID
nsv1075549 CNV deletion 25765185

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC102723701 Gene

Disorders for LOC102723701 Gene

Additional Disease Information for LOC102723701

No disorders were found for LOC102723701 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC102723701 Gene

Publications for LOC102723701 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC102723701 Gene

Sources for LOC102723701 Gene

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