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Aliases for LOC102723690 Gene

Subcategory (RNA class) for LOC102723690 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723690 Gene

  • Uncharacterized LOC102723690 3

External Ids for LOC102723690 Gene

Previous GeneCards Identifiers for LOC102723690 Gene

  • GC06U902561

Summaries for LOC102723690 Gene

GeneCards Summary for LOC102723690 Gene

LOC102723690 (Uncharacterized LOC102723690) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723690 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723690 Gene

Genomics for LOC102723690 Gene

GeneHancer (GH) Regulatory Elements for LOC102723690 Gene

Promoters and enhancers for LOC102723690 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J139250 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.9 873 4.3 CTCF RAD21 PKNOX1 RXRA ZNF143 SP1 JUNB NR2F2 SMARCA5 BATF LOC102723690 ENSG00000226571 TXLNB REPS1 ENSG00000272446
GH06J139289 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +41.4 41352 4.8 SP1 ZNF687 ZSCAN21 JUND RELA SP7 ZNF548 CREM PRDM1 MLLT1 TXLNB ENSG00000226571 CITED2 HECA REPS1 ABRACL ENSG00000272446 LOC102723690
GH06J139262 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +12.7 12696 1.8 CREM MLLT1 IKZF1 IKZF2 ZNF316 MAFK NFE2 RUNX3 MAFG ATF2 TXLNB ENSG00000226571 ENSG00000272446 LOC102723690
GH06J139279 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +29.6 29598 1.7 IKZF1 IKZF2 EED RUNX3 HDGF EBF1 POLR2A MYC MAX HLF TXLNB ENSG00000272446 ENSG00000226571 LOC102723690
GH06J139270 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +21.0 21043 1 IKZF1 BACH1 IKZF2 ATF2 ATF7 ENSG00000226571 TXLNB ENSG00000272446 LOC102723690
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723690 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723690 Gene

Genomic Locations for LOC102723690 Gene
chr6:139,250,258-139,302,539
(GRCh38/hg38)
Size:
52,282 bases
Orientation:
Plus strand

Genomic View for LOC102723690 Gene

Genes around LOC102723690 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723690 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723690 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723690 Gene

Proteins for LOC102723690 Gene

Post-translational modifications for LOC102723690 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723690 Gene

Domains & Families for LOC102723690 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723690 Gene

Function for LOC102723690 Gene

Phenotypes From GWAS Catalog for LOC102723690 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723690 Gene

Localization for LOC102723690 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723690 Gene

Pathways & Interactions for LOC102723690 Gene

PathCards logo

SuperPathways for LOC102723690 Gene

No Data Available

Interacting Proteins for LOC102723690 Gene

Gene Ontology (GO) - Biological Process for LOC102723690 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723690 Gene

Drugs & Compounds for LOC102723690 Gene

No Compound Related Data Available

Transcripts for LOC102723690 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723690 Gene

No ASD Table

Relevant External Links for LOC102723690 Gene

GeneLoc Exon Structure for
LOC102723690

No data available for mRNA/cDNA for LOC102723690 Gene

Expression for LOC102723690 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723690 Gene

Orthologs for LOC102723690 Gene

No data available for Orthologs and Evolution for LOC102723690 Gene

Paralogs for LOC102723690 Gene

No data available for Paralogs for LOC102723690 Gene

Variants for LOC102723690 Gene

Sequence variations from dbSNP and Humsavar for LOC102723690 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000045130 -- 139,260,907(+) C/T genic_upstream_transcript_variant, intron_variant
rs1000050518 -- 139,266,519(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000139642 -- 139,261,280(+) C/A genic_upstream_transcript_variant, intron_variant
rs1000179439 -- 139,268,586(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000202102 -- 139,254,443(+) T/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723690 Gene

Disorders for LOC102723690 Gene

No disorders were found for LOC102723690 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723690 Gene

Publications for LOC102723690 Gene

No publications were found for LOC102723690 Gene.

No data available for External Links for LOC102723690 Gene

Products for LOC102723690 Gene

Sources for LOC102723690 Gene

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