Aliases for LOC102723665 Gene

Subcategory (RNA class) for LOC102723665 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LOC102723665 Gene

  • Uncharacterized LOC102723665 3
  • NONHSAG006615.2 91
  • Lnc-PIK3AP1-6 165

External Ids for LOC102723665 Gene

Previous GeneCards Identifiers for LOC102723665 Gene

  • GC10U901837

Summaries for LOC102723665 Gene

GeneCards Summary for LOC102723665 Gene

LOC102723665 (Uncharacterized LOC102723665) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC102723665 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102723665 Gene

Genomics for LOC102723665 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC102723665 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J096830 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.1 -64 5 CTCF ZBTB33 PRDM10 ZNF512 IKZF1 ZNF692 POLR2A RCOR2 BACH1 LARP7 LCOR LOC102723665 ZNF518A CCNJ MMS19 EXOSC1 piR-55985-020 SLIT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723665 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC102723665 Gene

Genomic Locations for LOC102723665 Gene
chr10:96,830,563-96,832,458
(GRCh38/hg38)
Size:
1,896 bases
Orientation:
Minus strand

Genomic View for LOC102723665 Gene

Genes around LOC102723665 on UCSC Golden Path with GeneCards custom track
LOC102723665 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC102723665 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723665 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723665 Gene

Proteins for LOC102723665 Gene

Post-translational modifications for LOC102723665 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723665 Gene

Domains & Families for LOC102723665 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102723665 Gene

Function for LOC102723665 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723665 Gene

Localization for LOC102723665 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723665 Gene

Pathways & Interactions for LOC102723665 Gene

PathCards logo

SuperPathways for LOC102723665 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102723665 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC102723665 Gene

Drugs & Compounds for LOC102723665 Gene

No Compound Related Data Available

Transcripts for LOC102723665 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC102723665 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A7731D_9606 lncRNA 1827 2

RefSeq: NR_135921,

LNCipedia: lnc-PIK3AP1-6:4,

URS00008BA438_9606 lncRNA 1580 2

LNCipedia: lnc-PIK3AP1-6:1,

NONCODE: NONHSAT015837.2,

URS0000D5917B_9606 lncRNA 1664 1

LNCipedia: lnc-PIK3AP1-6:3,

URS0000D57842_9606 lncRNA 1540 1

LNCipedia: lnc-PIK3AP1-6:2,

LOC102723665 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC102723665 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723665 Gene

No ASD Table

Relevant External Links for LOC102723665 Gene

GeneLoc Exon Structure for
LOC102723665

Expression for LOC102723665 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723665 Gene

Orthologs for LOC102723665 Gene

No data available for Orthologs and Evolution for LOC102723665 Gene

Paralogs for LOC102723665 Gene

No data available for Paralogs for LOC102723665 Gene

Variants for LOC102723665 Gene

Additional dbSNP identifiers (rs#s) for LOC102723665 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723665 Gene

Disorders for LOC102723665 Gene

No disorders were found for LOC102723665 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723665 Gene

Publications for LOC102723665 Gene

  1. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M … Kato S (Investigative ophthalmology & visual science 2011) 3

No data available for Mastermind for LOC102723665 Gene

Products for LOC102723665 Gene

Sources for LOC102723665 Gene