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Aliases for LOC102723654 Gene

Subcategory (RNA class) for LOC102723654 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723654 Gene

  • Uncharacterized LOC102723654 3

External Ids for LOC102723654 Gene

Previous GeneCards Identifiers for LOC102723654 Gene

  • GC05U901926
  • GC05P129384

Summaries for LOC102723654 Gene

GeneCards Summary for LOC102723654 Gene

LOC102723654 (Uncharacterized LOC102723654) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723654 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723654 Gene

Genomics for LOC102723654 Gene

GeneHancer (GH) Regulatory Elements for LOC102723654 Gene

Promoters and enhancers for LOC102723654 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J129125 Enhancer 0.8 ENCODE 0.3 -26.7 -26673 1.3 CTCF SP1 CEBPG PKNOX1 RXRA CREB1 TARDBP GTF2E2 TRIM22 ZNF692 ISOC1 LOC102723654 MIR4633
GH05J129098 Promoter 0.8 Ensembl 0.2 -53.8 -53789 0.2 ZBTB17 DPF2 ZNF398 IKZF1 MIR4633 ISOC1 LOC102723654
GH05J129171 Enhancer 0.5 Ensembl 0.4 +19.3 19311 1.6 CTCF MNT SMARCA5 RAD21 ZNF654 LOC102723654 LOC105379169
GH05J129099 Promoter 0.7 Ensembl 0.2 -54.9 -54889 0.4 MLLT1 FEZF1 HNF4A MIR4633 ISOC1 LOC102723654
GH05J129117 Enhancer 0.4 Ensembl 0.3 -35.7 -35689 0.4 CEBPG ATF2 HLF SLC27A6 MIR4633 LOC102723654
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723654 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723654 Gene

Genomic Locations for LOC102723654 Gene
chr5:129,152,890-129,393,969
(GRCh38/hg38)
Size:
241,080 bases
Orientation:
Plus strand

Genomic View for LOC102723654 Gene

Genes around LOC102723654 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723654 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723654 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723654 Gene

Proteins for LOC102723654 Gene

Post-translational modifications for LOC102723654 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723654 Gene

Domains & Families for LOC102723654 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723654 Gene

Function for LOC102723654 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723654 Gene

Localization for LOC102723654 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723654 Gene

Pathways & Interactions for LOC102723654 Gene

PathCards logo

SuperPathways for LOC102723654 Gene

No Data Available

Interacting Proteins for LOC102723654 Gene

Gene Ontology (GO) - Biological Process for LOC102723654 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723654 Gene

Drugs & Compounds for LOC102723654 Gene

No Compound Related Data Available

Transcripts for LOC102723654 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723654 Gene

No ASD Table

Relevant External Links for LOC102723654 Gene

GeneLoc Exon Structure for
LOC102723654

No data available for mRNA/cDNA for LOC102723654 Gene

Expression for LOC102723654 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723654 Gene

Orthologs for LOC102723654 Gene

No data available for Orthologs and Evolution for LOC102723654 Gene

Paralogs for LOC102723654 Gene

No data available for Paralogs for LOC102723654 Gene

Variants for LOC102723654 Gene

Sequence variations from dbSNP and Humsavar for LOC102723654 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000016578 -- 129,215,209(+) A/C intron_variant
rs1000018965 -- 129,224,451(+) T/C intron_variant
rs1000020727 -- 129,256,350(+) C/G intron_variant
rs1000021887 -- 129,332,630(+) A/G intron_variant
rs1000029110 -- 129,340,222(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723654 Gene

Disorders for LOC102723654 Gene

No disorders were found for LOC102723654 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723654 Gene

Publications for LOC102723654 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 58

No data available for External Links for LOC102723654 Gene

Products for LOC102723654 Gene

Sources for LOC102723654 Gene

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