Aliases for LOC102723648 Gene

Subcategory (RNA class) for LOC102723648 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723648 Gene

  • Uncharacterized LOC102723648 3

External Ids for LOC102723648 Gene

Previous GeneCards Identifiers for LOC102723648 Gene

  • GC06U902651

Summaries for LOC102723648 Gene

GeneCards Summary for LOC102723648 Gene

LOC102723648 (Uncharacterized LOC102723648) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723648 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC102723648 Gene

Genomics for LOC102723648 Gene

GeneHancer (GH) Regulatory Elements for LOC102723648 Gene

Promoters and enhancers for LOC102723648 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J036195 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -0.5 -474 3.4 SP1 CTCF POLR2A NR2F1 FOS CREB1 ZNF362 NFYC L3MBTL2 RAD21 ENSG00000246982 BRPF3 LOC102723648 MAPK13 MAPK14 DEF6 SLC26A8
GH06J036153 Enhancer 0.8 Ensembl ENCODE 0.3 +42.5 42470 2.7 ZNF217 MTA3 CTBP1 PKNOX1 DPF2 GATAD2B CUX1 GATA3 ELF1 JUND MAPK13 ENSG00000246982 SLC26A8 lnc-MAPK13-4 piR-44110-070 LOC102723648
GH06J036176 Enhancer 0.4 Ensembl 0.4 +19.5 19526 0.6 RELA IKZF1 PKNOX1 MAPK13 ENSG00000246982 SLC26A8 L13714-391 LOC102723648 lnc-MAPK13-4
GH06J036150 Enhancer 0.6 Ensembl dbSUPER 0.2 +46.1 46126 1 ZSCAN4 CEBPG CEBPB piR-44110-070 ENSG00000246982 lnc-MAPK13-4 LOC102723648
GH06J036146 Enhancer 0.5 Ensembl dbSUPER 0.2 +49.9 49926 3.4 ZNF121 BCOR MAPK13 ENSG00000246982 piR-44110-070 piR-54319 LOC102723648
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723648 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723648 Gene

Genomic Locations for LOC102723648 Gene
chr6:36,146,708-36,196,427
(GRCh38/hg38)
Size:
49,720 bases
Orientation:
Minus strand

Genomic View for LOC102723648 Gene

Genes around LOC102723648 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723648 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723648 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723648 Gene

Proteins for LOC102723648 Gene

Post-translational modifications for LOC102723648 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723648 Gene

Domains & Families for LOC102723648 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC102723648 Gene

Function for LOC102723648 Gene

Phenotypes From GWAS Catalog for LOC102723648 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723648 Gene

Localization for LOC102723648 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723648 Gene

Pathways & Interactions for LOC102723648 Gene

PathCards logo

SuperPathways for LOC102723648 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC102723648 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723648 Gene

Drugs & Compounds for LOC102723648 Gene

No Compound Related Data Available

Transcripts for LOC102723648 Gene

mRNA/cDNA for LOC102723648 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723648 Gene

No ASD Table

Relevant External Links for LOC102723648 Gene

GeneLoc Exon Structure for
LOC102723648

Expression for LOC102723648 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102723648 Gene

genes like me logo Genes that share expression patterns with LOC102723648: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723648 Gene

Orthologs for LOC102723648 Gene

No data available for Orthologs and Evolution for LOC102723648 Gene

Paralogs for LOC102723648 Gene

No data available for Paralogs for LOC102723648 Gene

Variants for LOC102723648 Gene

Sequence variations from dbSNP and Humsavar for LOC102723648 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000000035 -- 36,175,191(-) A/G intron_variant
rs1000019469 -- 36,155,842(-) C/G genic_downstream_transcript_variant, intron_variant
rs1000368146 -- 36,153,758(-) G/C genic_downstream_transcript_variant, intron_variant
rs1000750625 -- 36,152,430(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000758022 -- 36,161,418(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723648 Gene

Disorders for LOC102723648 Gene

No disorders were found for LOC102723648 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723648 Gene

Publications for LOC102723648 Gene

No publications were found for LOC102723648 Gene.

No data available for External Links for LOC102723648 Gene

Products for LOC102723648 Gene

Sources for LOC102723648 Gene