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Aliases for LOC102723568 Gene

Subcategory (RNA class) for LOC102723568 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723568 Gene

  • Uncharacterized LOC102723568 3

External Ids for LOC102723568 Gene

Previous GeneCards Identifiers for LOC102723568 Gene

  • GC11U902195
  • GC11P034715

Summaries for LOC102723568 Gene

GeneCards Summary for LOC102723568 Gene

LOC102723568 (Uncharacterized LOC102723568) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723568 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723568 Gene

Genomics for LOC102723568 Gene

GeneHancer (GH) Regulatory Elements for LOC102723568 Gene

Promoters and enhancers for LOC102723568 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J034749 Enhancer 0.8 Ensembl ENCODE 0.2 +57.5 57518 2.2 SP1 PRDM10 ZNF512 CEBPB YY1 GATA3 RAD21 CEBPG FOXK2 JUND APIP ENSG00000270491 GC11P034781 LOC102723568
GH11J034824 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.1 +133.0 133017 4 CBFA2T2 ELF3 RERE CEBPG TFE3 PPARG HNF1A SP5 ZNF644 KAT8 LOC105376625 ELF5 EHF APIP PDHX GC11M034814 LOC102723568
GH11J034784 Enhancer 0.9 Ensembl 0.2 +91.5 91536 1.3 ZNF652 SP1 CEBPG TFE3 PPARG SP5 ZNF644 KAT8 RXRA HMG20B APIP NAT10 CAPRIN1 EHF PDHX GC11P034781 PIR36408 LOC102723568
GH11J034808 Enhancer 1.1 Ensembl ENCODE 0.1 +117.0 116971 2.1 ZKSCAN8 CBFA2T2 TRIM24 SMARCA4 ZNF639 IKZF1 CAVIN1 DPF2 REST ATF1 APIP NAT10 EHF PDHX GC11M034814 GC11M034793 LOC102723568
GH11J034707 Enhancer 0.3 Ensembl 0.4 +14.7 14717 0.6 POLR2A APIP ENSG00000271369 LOC102723568 NDUFB8P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723568 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723568 Gene

Genomic Locations for LOC102723568 Gene
chr11:34,692,784-34,877,212
(GRCh38/hg38)
Size:
184,429 bases
Orientation:
Plus strand

Genomic View for LOC102723568 Gene

Genes around LOC102723568 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723568 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723568 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723568 Gene

Proteins for LOC102723568 Gene

Post-translational modifications for LOC102723568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723568 Gene

Domains & Families for LOC102723568 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723568 Gene

Function for LOC102723568 Gene

Phenotypes From GWAS Catalog for LOC102723568 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723568 Gene

Localization for LOC102723568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723568 Gene

Pathways & Interactions for LOC102723568 Gene

PathCards logo

SuperPathways for LOC102723568 Gene

No Data Available

Interacting Proteins for LOC102723568 Gene

Gene Ontology (GO) - Biological Process for LOC102723568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723568 Gene

Drugs & Compounds for LOC102723568 Gene

No Compound Related Data Available

Transcripts for LOC102723568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723568 Gene

No ASD Table

Relevant External Links for LOC102723568 Gene

GeneLoc Exon Structure for
LOC102723568

No data available for mRNA/cDNA for LOC102723568 Gene

Expression for LOC102723568 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723568 Gene

Orthologs for LOC102723568 Gene

No data available for Orthologs and Evolution for LOC102723568 Gene

Paralogs for LOC102723568 Gene

No data available for Paralogs for LOC102723568 Gene

Variants for LOC102723568 Gene

Sequence variations from dbSNP and Humsavar for LOC102723568 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000043317 -- 34,860,113(+) A/T genic_downstream_transcript_variant, intron_variant
rs1000045308 -- 34,797,082(+) G/C genic_downstream_transcript_variant, intron_variant
rs1000058916 -- 34,767,933(+) T/G genic_downstream_transcript_variant, intron_variant
rs1000060208 -- 34,758,090(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000062839 -- 34,762,652(+) T/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723568 Gene

Disorders for LOC102723568 Gene

No disorders were found for LOC102723568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723568 Gene

Publications for LOC102723568 Gene

  1. A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. (PMID: 23740937) Martin JE … Martin J (Human molecular genetics 2013) 3 58

No data available for External Links for LOC102723568 Gene

Products for LOC102723568 Gene

Sources for LOC102723568 Gene

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