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Aliases for LOC102723539 Gene

Subcategory (RNA class) for LOC102723539 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723539 Gene

  • Uncharacterized LOC102723539 3

External Ids for LOC102723539 Gene

Previous GeneCards Identifiers for LOC102723539 Gene

  • GC11U902186

Summaries for LOC102723539 Gene

GeneCards Summary for LOC102723539 Gene

LOC102723539 (Uncharacterized LOC102723539) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723539 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723539 Gene

Genomics for LOC102723539 Gene

GeneHancer (GH) Regulatory Elements for LOC102723539 Gene

Promoters and enhancers for LOC102723539 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J034153 Enhancer 0.6 ENCODE 600.7 -0.1 -128 1.5 ZNF687 IKZF1 IKZF2 DPF2 EED TSC22D4 RUNX3 ELF1 IRF4 EBF1 GC11P034155 LOC102723539 ABTB2 NAT10 ENSG00000241255 GC11P034115 PIR31774
GH11J034155 Enhancer 0.3 dbSUPER 600.7 +1.3 1280 1 POLR2A LOC102723539 GC11P034155 ABTB2 NAT10 CAPRIN1 GC11M034170
GH11J034147 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -5.4 -5448 3.4 POLR2A CTCF RAD21 SMC3 RCOR1 ZNF335 CEBPB PAF1 MYC MAX ABTB2 CAPRIN1 NAT10 LOC102723539 GC11P034115 PIR31774
GH11J034157 Enhancer 0.4 dbSUPER 0.7 +2.7 2724 0.9 ZNF157 HNF4A HLF GC11P034155 ABTB2 NAT10 LOC102723539 GC11M034170
GH11J034144 Enhancer 0.6 ENCODE 0.4 -9.6 -9592 1.4 ZNF687 IKZF1 IKZF2 RUNX3 NBN JUNB SMARCA5 IRF4 BATF EBF1 ABTB2 CAPRIN1 LOC102723539 GC11P034115 PIR31774 NAT10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723539 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723539 Gene

Genomic Locations for LOC102723539 Gene
chr11:34,154,778-34,159,974
(GRCh38/hg38)
Size:
5,197 bases
Orientation:
Plus strand

Genomic View for LOC102723539 Gene

Genes around LOC102723539 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723539 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723539 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723539 Gene

Proteins for LOC102723539 Gene

Post-translational modifications for LOC102723539 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723539 Gene

Domains & Families for LOC102723539 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723539 Gene

Function for LOC102723539 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723539 Gene

Localization for LOC102723539 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723539 Gene

Pathways & Interactions for LOC102723539 Gene

PathCards logo

SuperPathways for LOC102723539 Gene

No Data Available

Interacting Proteins for LOC102723539 Gene

Gene Ontology (GO) - Biological Process for LOC102723539 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723539 Gene

Drugs & Compounds for LOC102723539 Gene

No Compound Related Data Available

Transcripts for LOC102723539 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723539 Gene

No ASD Table

Relevant External Links for LOC102723539 Gene

GeneLoc Exon Structure for
LOC102723539

No data available for mRNA/cDNA for LOC102723539 Gene

Expression for LOC102723539 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723539 Gene

Orthologs for LOC102723539 Gene

No data available for Orthologs and Evolution for LOC102723539 Gene

Paralogs for LOC102723539 Gene

No data available for Paralogs for LOC102723539 Gene

Variants for LOC102723539 Gene

Sequence variations from dbSNP and Humsavar for LOC102723539 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000069444 -- 34,153,914(+) G/A upstream_transcript_variant
rs1000266013 -- 34,159,784(+) T/C non_coding_transcript_variant
rs1000699897 -- 34,159,613(+) C/T non_coding_transcript_variant
rs1001002084 -- 34,158,574(+) C/G/T intron_variant
rs1001112311 -- 34,158,543(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723539 Gene

Disorders for LOC102723539 Gene

No disorders were found for LOC102723539 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723539 Gene

Publications for LOC102723539 Gene

No publications were found for LOC102723539 Gene.

No data available for External Links for LOC102723539 Gene

Products for LOC102723539 Gene

Sources for LOC102723539 Gene

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