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Aliases for LOC102723506 Gene

Subcategory (RNA class) for LOC102723506 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723506 Gene

  • Uncharacterized LOC102723506 3

External Ids for LOC102723506 Gene

Previous GeneCards Identifiers for LOC102723506 Gene

  • GC18U900857

Summaries for LOC102723506 Gene

GeneCards Summary for LOC102723506 Gene

LOC102723506 (Uncharacterized LOC102723506) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723506 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723506 Gene

Genomics for LOC102723506 Gene

GeneHancer (GH) Regulatory Elements for LOC102723506 Gene

Promoters and enhancers for LOC102723506 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J079528 Enhancer 0.7 ENCODE 600.7 -1.6 -1564 0.2 CC2D1A CTCF RAD21 ARID2 ZNF143 REST TRIM22 SCRT2 RUNX3 SCRT1 LOC102723506 PIR45141 NFATC1
GH18J079526 Promoter 0.5 Ensembl 600.7 +0.9 901 0.2 LOC102723506 ENSG00000279397 NFATC1
GH18J079525 Enhancer 0.3 dbSUPER 600.7 +1.6 1611 0.9 ZNF202 LOC102723506 ATP9B ADNP2 RBFA ENSG00000279397 NFATC1
GH18J079521 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.9 3933 3.1 SP1 ZNF687 MLLT1 ZBED1 IKZF1 IKZF2 LARP7 TRIM22 CBFB DPF2 NFATC1 HSBP1L1 ATP9B CTDP1 LOC102723506 ENSG00000279397
GH18J079515 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.4 10378 2.2 IKZF1 MGA MNT MEF2D ZNF592 L3MBTL2 ENSG00000279397 HSBP1L1 NFATC1 ATP9B CTDP1 LOC102723506
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723506 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723506 Gene

Genomic Locations for LOC102723506 Gene
chr18:79,515,804-79,527,402
(GRCh38/hg38)
Size:
11,599 bases
Orientation:
Minus strand

Genomic View for LOC102723506 Gene

Genes around LOC102723506 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723506 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723506 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723506 Gene

Proteins for LOC102723506 Gene

Post-translational modifications for LOC102723506 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723506 Gene

Domains & Families for LOC102723506 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723506 Gene

Function for LOC102723506 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723506 Gene

Localization for LOC102723506 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723506 Gene

Pathways & Interactions for LOC102723506 Gene

PathCards logo

SuperPathways for LOC102723506 Gene

No Data Available

Interacting Proteins for LOC102723506 Gene

Gene Ontology (GO) - Biological Process for LOC102723506 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723506 Gene

Drugs & Compounds for LOC102723506 Gene

No Compound Related Data Available

Transcripts for LOC102723506 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723506 Gene

No ASD Table

Relevant External Links for LOC102723506 Gene

GeneLoc Exon Structure for
LOC102723506

No data available for mRNA/cDNA for LOC102723506 Gene

Expression for LOC102723506 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723506 Gene

Orthologs for LOC102723506 Gene

No data available for Orthologs and Evolution for LOC102723506 Gene

Paralogs for LOC102723506 Gene

No data available for Paralogs for LOC102723506 Gene

Variants for LOC102723506 Gene

Sequence variations from dbSNP and Humsavar for LOC102723506 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000905181 -- 79,524,340(-) C/T non_coding_transcript_variant
rs1001057572 -- 79,522,699(-) A/G non_coding_transcript_variant
rs1001072495 -- 79,528,551(-) G/A upstream_transcript_variant
rs1001419071 -- 79,528,734(-) A/AA upstream_transcript_variant
rs1001448460 -- 79,526,966(-) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723506 Gene

Disorders for LOC102723506 Gene

No disorders were found for LOC102723506 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723506 Gene

Publications for LOC102723506 Gene

No publications were found for LOC102723506 Gene.

No data available for External Links for LOC102723506 Gene

Products for LOC102723506 Gene

Sources for LOC102723506 Gene

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