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Aliases for LOC102723493 Gene

Subcategory (RNA class) for LOC102723493 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723493 Gene

  • Uncharacterized LOC102723493 3

External Ids for LOC102723493 Gene

Previous GeneCards Identifiers for LOC102723493 Gene

  • GC15U901738

Summaries for LOC102723493 Gene

GeneCards Summary for LOC102723493 Gene

LOC102723493 (Uncharacterized LOC102723493) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC102723493 include Loeys-Dietz Syndrome.

Additional gene information for LOC102723493 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723493 Gene

Genomics for LOC102723493 Gene

GeneHancer (GH) Regulatory Elements for LOC102723493 Gene

Promoters and enhancers for LOC102723493 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J067060 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 -2.0 -1971 11 ZNF652 ZFX ELF3 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 ZNF121 SMAD3 LOC102723493 PIR44207 ENSG00000259347 ENSG00000260773 SKOR1 MAP2K5 IQCH-AS1 RPL4 IQCH
GH15J067057 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 +5.3 5294 1.9 CEBPG SP1 SP5 ZNF384 RXRA CEBPA GATAD2A SOX13 KAT7 JUND IQCH AAGAB SMAD3 ENSG00000259347 LOC102723493 HMGN2P47
GH15J067047 Enhancer 1.3 ENCODE dbSUPER 0.4 +14.7 14668 5 ZNF473 ZNF652 ELF3 MNT CEBPG RERE ZSCAN21 ZNF24 MAFK TFE3 TIPIN ZWILCH ENSG00000260773 SMAD3 LOC102723493 ENSG00000259347 HMGN2P47
GH15J067037 Enhancer 1.2 ENCODE dbSUPER 0.3 +22.4 22404 7.6 ELF3 ZNF121 CEBPG ZSCAN21 IKZF1 MCM2 MAFK TFE3 SP7 PRDM1 ENSG00000260773 IQCH-AS1 TIPIN SMAD3 RPL35AP32 ZWILCH SNAPC5 SNORD16 SKOR1 IQCH
GH15J067029 Enhancer 1.2 ENCODE dbSUPER 0.3 +33.9 33859 1.6 SP1 ELF3 CBFA2T2 MLLT1 RERE TFE3 TRIM24 SP7 HNF1A PPARG IQCH AAGAB SMAD3 HMGN2P47 ENSG00000259347 LOC102723493
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723493 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723493 Gene

Genomic Locations for LOC102723493 Gene
chr15:66,984,106-67,064,182
(GRCh38/hg38)
Size:
80,077 bases
Orientation:
Minus strand

Genomic View for LOC102723493 Gene

Genes around LOC102723493 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723493 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723493 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723493 Gene

Proteins for LOC102723493 Gene

Post-translational modifications for LOC102723493 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723493 Gene

Domains & Families for LOC102723493 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723493 Gene

Function for LOC102723493 Gene

Phenotypes From GWAS Catalog for LOC102723493 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723493 Gene

Localization for LOC102723493 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723493 Gene

Pathways & Interactions for LOC102723493 Gene

PathCards logo

SuperPathways for LOC102723493 Gene

No Data Available

Interacting Proteins for LOC102723493 Gene

Gene Ontology (GO) - Biological Process for LOC102723493 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723493 Gene

Drugs & Compounds for LOC102723493 Gene

No Compound Related Data Available

Transcripts for LOC102723493 Gene

mRNA/cDNA for LOC102723493 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723493 Gene

No ASD Table

Relevant External Links for LOC102723493 Gene

GeneLoc Exon Structure for
LOC102723493

Expression for LOC102723493 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723493 Gene

Orthologs for LOC102723493 Gene

No data available for Orthologs and Evolution for LOC102723493 Gene

Paralogs for LOC102723493 Gene

No data available for Paralogs for LOC102723493 Gene

Variants for LOC102723493 Gene

Sequence variations from dbSNP and Humsavar for LOC102723493 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1061427 benign, not specified, Thoracic aortic aneurysm and aortic dissection, Loeys-Dietz syndrome 67,066,140(-) G/A/C upstream_transcript_variant
rs144374592 benign, not specified, Loeys-Dietz syndrome, Thoracic aortic aneurysm and aortic dissection 67,066,127(-) C/T upstream_transcript_variant
rs149022137 likely-benign, Cardiovascular phenotype 67,066,163(-) C/T upstream_transcript_variant
rs1555405092 likely-pathogenic, Cardiovascular phenotype 67,066,155(-) A/C upstream_transcript_variant
rs36221703 benign, not specified, Loeys-Dietz syndrome, Thoracic aortic aneurysm and aortic dissection 67,066,132(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723493 Gene

Disorders for LOC102723493 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC102723493 Gene - From: GeneCards

Disorder Aliases PubMed IDs
loeys-dietz syndrome
  • furlong syndrome
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC102723493: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723493 Gene

Publications for LOC102723493 Gene

No publications were found for LOC102723493 Gene.

No data available for External Links for LOC102723493 Gene

Products for LOC102723493 Gene

Sources for LOC102723493 Gene

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