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Aliases for LOC102723480 Gene

Subcategory (RNA class) for LOC102723480 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC102723480 Gene

  • Uncharacterized LOC102723480 3

External Ids for LOC102723480 Gene

Previous GeneCards Identifiers for LOC102723480 Gene

  • GC01U904088

Summaries for LOC102723480 Gene

GeneCards Summary for LOC102723480 Gene

LOC102723480 (Uncharacterized LOC102723480) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102723480 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723480 Gene

Genomics for LOC102723480 Gene

GeneHancer (GH) Regulatory Elements for LOC102723480 Gene

Promoters and enhancers for LOC102723480 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J093691 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 600.7 +0.6 585 5.5 SP1 ZNF687 MAFK SP7 RELA CREM ZBED1 IKZF1 POLR2A IKZF2 LOC102723480 SNORA66 DNTTIP2 CCDC18-AS1 GCLM BCAR3 GC01P093728
GH01J093675 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -14.0 -14006 7.6 CTCF NKRF CEBPG ZNF687 SP7 MZF1 KAT8 GLIS2 POLR2A ZNF600 BCAR3 EVI5 LOC102723480 GC01M093613
GH01J093698 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.4 13419 16.4 SP1 NKRF MAFK ELF1 RELA CREM MLLT1 ZBED1 IKZF1 ZBTB33 SNORA66 DNTTIP2 CCDC18-AS1 DR1 DIPK1A BCAR3 GCLM LOC102723480 GC01P093728
GH01J093661 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -25.2 -25193 13.8 ZNF652 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 CEBPG GTF2F1 NFIB ZSCAN21 BACH1 CCDC18-AS1 DNTTIP2 SNORA66 ENSG00000224093 BCAR3 GCLM TMED5 EVI5 FNBP1L GC01M093613
GH01J093721 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +29.4 29442 3.7 ZIC2 SOX13 EZH2 NR2F2 TCF7L2 XRCC5 RAD21 JUND SOX5 POLR2A FNBP1L GC01P093728 LOC102723480 BCAR3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC102723480 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC102723480 Gene

Genomic Locations for LOC102723480 Gene
chr1:93,693,196-93,699,548
(GRCh38/hg38)
Size:
6,353 bases
Orientation:
Plus strand

Genomic View for LOC102723480 Gene

Genes around LOC102723480 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723480 Gene

Proteins for LOC102723480 Gene

Post-translational modifications for LOC102723480 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723480 Gene

Domains & Families for LOC102723480 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723480 Gene

Function for LOC102723480 Gene

Phenotypes From GWAS Catalog for LOC102723480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723480 Gene

Localization for LOC102723480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102723480 Gene

Pathways & Interactions for LOC102723480 Gene

PathCards logo

SuperPathways for LOC102723480 Gene

No Data Available

Interacting Proteins for LOC102723480 Gene

Gene Ontology (GO) - Biological Process for LOC102723480 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723480 Gene

Drugs & Compounds for LOC102723480 Gene

No Compound Related Data Available

Transcripts for LOC102723480 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723480 Gene

No ASD Table

Relevant External Links for LOC102723480 Gene

GeneLoc Exon Structure for
LOC102723480

No data available for mRNA/cDNA for LOC102723480 Gene

Expression for LOC102723480 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723480 Gene

Orthologs for LOC102723480 Gene

No data available for Orthologs and Evolution for LOC102723480 Gene

Paralogs for LOC102723480 Gene

No data available for Paralogs for LOC102723480 Gene

Variants for LOC102723480 Gene

Sequence variations from dbSNP and Humsavar for LOC102723480 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000044965 -- 93,690,855(+) C/G upstream_transcript_variant
rs1001020380 -- 93,696,460(+) T/A intron_variant
rs1001350754 -- 93,699,100(+) C/T intron_variant
rs1001378936 -- 93,697,343(+) G/A intron_variant
rs1001393492 -- 93,692,100(+) A/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC102723480 Gene

Disorders for LOC102723480 Gene

No disorders were found for LOC102723480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723480 Gene

Publications for LOC102723480 Gene

No publications were found for LOC102723480 Gene.

No data available for External Links for LOC102723480 Gene

Products for LOC102723480 Gene

Sources for LOC102723480 Gene

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